Non-allelic gene conversion enables rapid evolutionary change at multiple regulatory sites encoded by transposable elements

por Ellison, Christopher E, Bachtrog, Doris
Publicado 2015

Nanopore sequencing and Hi-C scaffolding provide insight into the evolutionary dynamics of transposable elements and piRNA production in wild strains of Drosophila melanogaster

por Ellison, Christopher E, Cao, Weihuan
Publicado 2020

Adenine Methylation in Drosophila Is Associated with the Tissue-Specific Expression of Developmental and Regulatory Genes

por Shah, Kinnary, Cao, Weihuan, Ellison, Christopher E.
Publicado 2019

Telomeric TART elements target the piRNA machinery in Drosophila

por Ellison, Christopher E., Kagda, Meenakshi S., Cao, Weihuan
Publicado 2020

A transposon expression burst accompanies the activation of Y-chromosome fertility genes during Drosophila spermatogenesis

por Lawlor, Matthew A., Cao, Weihuan, Ellison, Christopher E.
Publicado 2021

Sex-specific variation in R-loop formation in Drosophila melanogaster

por Stanek, Timothy J., Cao, Weihuan, Mehra, Rohan M, Ellison, Christopher E.
Publicado 2022

3D genome evolution and reorganization in the Drosophila melanogaster species group

por Torosin, Nicole S., Anand, Aparna, Golla, Tirupathi Rao, Cao, Weihuan, Ellison, Christopher E.
Publicado 2020

Mode and Tempo of 3D Genome Evolution in Drosophila

por Torosin, Nicole S, Golla, Tirupathi Rao, Lawlor, Matthew A, Cao, Weihuan, Ellison, Christopher E
Publicado 2022

Discovering Functions of Unannotated Genes from a Transcriptome Survey of Wild Fungal Isolates

por Ellison, Christopher E., Kowbel, David, Glass, N. Louise, Taylor, John W., Brem, Rachel B.
Publicado 2014

Structural Variation among Wild and Industrial Strains of Penicillium chrysogenum

por Wong, Valerie L., Ellison, Christopher E., Eisen, Michael B., Pachter, Lior, Brem, Rachel B.
Publicado 2014

The Epigenome of Evolving Drosophila Neo-Sex Chromosomes: Dosage Compensation and Heterochromatin Formation

por Zhou, Qi, Ellison, Christopher E., Kaiser, Vera B., Alekseyenko, Artyom A., Gorchakov, Andrey A., Bachtrog, Doris
Publicado 2013

Long-read genome assemblies for the study of chromosome expansion: Drosophila kikkawai, Drosophila takahashii, Drosophila bipectinata, and Drosophila ananassae

por Leung, Wilson, Torosin, Nicole, Cao, Weihuan, Reed, Laura K, Arrigo, Cindy, Elgin, Sarah C R, Ellison, Christopher E
Publicado 2023

Long-read genome assemblies for the study of chromosome expansion: Drosophila kikkawai, Drosophila takahashii, Drosophila bipectinata, and Drosophila ananassae

por Leung, Wilson, Torosin, Nicole, Cao, Weihuan, Reed, Laura K, Arrigo, Cindy, Elgin, Sarah C R, Ellison, Christopher E
Publicado 2023

Three-dimensional interactions between enhancers and promoters during intestinal differentiation depend upon HNF4

por Chen, Lei, Cao, Weihuan, Aita, Rohit, Aldea, Dennis, Flores, Juan, Gao, Nan, Bonder, Edward M., Ellison, Christopher E., Verzi, Michael P.
Publicado 2021

Massive Changes in Genome Architecture Accompany the Transition to Self-Fertility in the Filamentous Fungus Neurospora tetrasperma

por Ellison, Christopher E., Stajich, Jason E., Jacobson, David J., Natvig, Donald O., Lapidus, Alla, Foster, Brian, Aerts, Andrea, Riley, Robert, Lindquist, Erika A., Grigoriev, Igor V., Taylor, John W.
Publicado 2011

KAT2 paralogs prevent dsRNA accumulation and interferon signaling to maintain intestinal stem cells

por Nguyen, Mai-Uyen, Potgieter, Sarah, Huang, Winston, Pfeffer, Julie, Woo, Sean, Zhao, Caifeng, Lawlor, Matthew, Yang, Richard, Halstead, Angela, Dent, Sharon, Sáenz, José B., Zheng, Haiyan, Yuan, Zuo-Fei, Sidoli, Simone, Ellison, Christopher E., Verzi, Michael
Publicado 2023

The nuclear receptor HNF4 drives a brush border gene program conserved across murine intestine, kidney, and embryonic yolk sac

por Chen, Lei, Luo, Shirley, Dupre, Abigail, Vasoya, Roshan P., Parthasarathy, Aditya, Aita, Rohit, Malhotra, Raj, Hur, Joseph, Toke, Natalie H., Chiles, Eric, Yang, Min, Cao, Weihuan, Flores, Juan, Ellison, Christopher E., Gao, Nan, Sahota, Amrik, Su, Xiaoyang, Bonder, Edward M., Verzi, Michael P.
Publicado 2021