FREQ-Seq(2): a method for precise high-throughput combinatorial quantification of allele frequencies

por Zhao, Roy, Lukacsovich, Tamas, Gaut, Rebecca, Emerson, J J
Publicado 2023

Topologically associating domains and their role in the evolution of genome structure and function in Drosophila

por Liao, Yi, Zhang, Xinwen, Chakraborty, Mahul, Emerson, J.J.
Publicado 2021

Drosophila Duplication Hotspots Are Associated with Late-Replicating Regions of the Genome

por Cardoso-Moreira, Margarida, Emerson, J. J., Clark, Andrew G., Long, Manyuan
Publicado 2011

Comparative Sex Chromosome Genomics in Snakes: Differentiation, Evolutionary Strata, and Lack of Global Dosage Compensation

por Vicoso, Beatriz, Emerson, J. J., Zektser, Yulia, Mahajan, Shivani, Bachtrog, Doris
Publicado 2013

Structural variants exhibit widespread allelic heterogeneity and shape variation in complex traits

por Chakraborty, Mahul, Emerson, J. J., Macdonald, Stuart J., Long, Anthony D.
Publicado 2019

Contiguous and accurate de novo assembly of metazoan genomes with modest long read coverage

por Chakraborty, Mahul, Baldwin-Brown, James G., Long, Anthony D., Emerson, J. J.
Publicado 2016

Hidden genetic variation shapes the structure of functional elements in Drosophila

por Chakraborty, Mahul, VanKuren, Nicholas W., Zhao, Roy, Zhang, Xinwen, Kalsow, Shannon, Emerson, J. J.
Publicado 2017

Evolutionary Genomics of Structural Variation in Asian Rice (Oryza sativa) Domestication

por Kou, Yixuan, Liao, Yi, Toivainen, Tuomas, Lv, Yuanda, Tian, Xinmin, Emerson, J J, Gaut, Brandon S, Zhou, Yongfeng
Publicado 2020

Rapid Low-Cost Assembly of the Drosophila melanogaster Reference Genome Using Low-Coverage, Long-Read Sequencing

por Solares, Edwin A., Chakraborty, Mahul, Miller, Danny E., Kalsow, Shannon, Hall, Kate, Perera, Anoja G., Emerson, J. J., Hawley, R. Scott
Publicado 2018

The 3D architecture of the pepper genome and its relationship to function and evolution

por Liao, Yi, Wang, Juntao, Zhu, Zhangsheng, Liu, Yuanlong, Chen, Jinfeng, Zhou, Yongfeng, Liu, Feng, Lei, Jianjun, Gaut, Brandon S., Cao, Bihao, Emerson, J. J., Chen, Changming
Publicado 2022

Evolution of genome structure in the Drosophila simulans species complex

por Chakraborty, Mahul, Chang, Ching-Ho, Khost, Danielle E., Vedanayagam, Jeffrey, Adrion, Jeffrey R., Liao, Yi, Montooth, Kristi L., Meiklejohn, Colin D., Larracuente, Amanda M., Emerson, J.J.
Publicado 2021

Behavioral and Genomic Sensory Adaptations Underlying the Pest Activity of Drosophila suzukii

por Durkin, Sylvia M, Chakraborty, Mahul, Abrieux, Antoine, Lewald, Kyle M, Gadau, Alice, Svetec, Nicolas, Peng, Junhui, Kopyto, Miriam, Langer, Christopher B, Chiu, Joanna C, Emerson, J J, Zhao, Li
Publicado 2021

Hidden genomic features of an invasive malaria vector, Anopheles stephensi, revealed by a chromosome-level genome assembly

por Chakraborty, Mahul, Ramaiah, Arunachalam, Adolfi, Adriana, Halas, Paige, Kaduskar, Bhagyashree, Ngo, Luna Thanh, Jayaprasad, Suvratha, Paul, Kiran, Whadgar, Saurabh, Srinivasan, Subhashini, Subramani, Suresh, Bier, Ethan, James, Anthony A., Emerson, J. J.
Publicado 2021

Author Correction: Hidden genomic features of an invasive malaria vector, Anopheles stephensi, revealed by a chromosome-level genome assembly

por Chakraborty, Mahul, Ramaiah, Arunachalam, Adolfi, Adriana, Halas, Paige, Kaduskar, Bhagyashree, Ngo, Luna Thanh, Jayaprasad, Suvratha, Paul, Kiran, Whadgar, Saurabh, Srinivasan, Subhashini, Subramani, Suresh, Bier, Ethan, James, Anthony A., Emerson, J. J.
Publicado 2022

Population Genomics of Sub-Saharan Drosophila melanogaster: African Diversity and Non-African Admixture

por Pool, John E., Corbett-Detig, Russell B., Sugino, Ryuichi P., Stevens, Kristian A., Cardeno, Charis M., Crepeau, Marc W., Duchen, Pablo, Emerson, J. J., Saelao, Perot, Begun, David J., Langley, Charles H.
Publicado 2012

Efficient population modification gene-drive rescue system in the malaria mosquito Anopheles stephensi

por Adolfi, Adriana, Gantz, Valentino M., Jasinskiene, Nijole, Lee, Hsu-Feng, Hwang, Kristy, Terradas, Gerard, Bulger, Emily A., Ramaiah, Arunachalam, Bennett, Jared B., Emerson, J. J., Marshall, John M., Bier, Ethan, James, Anthony A.
Publicado 2020

Sex-linked gene traffic underlies the acquisition of sexually dimorphic UV color vision in Heliconius butterflies

por Chakraborty, Mahul, Lara, Angelica Guadalupe, Dang, Andrew, McCulloch, Kyle J., Rainbow, Dylan, Carter, David, Ngo, Luna Thanh, Solares, Edwin, Said, Iskander, Corbett-Detig, Russell B., Gilbert, Lawrence E., Emerson, J. J., Briscoe, Adriana D.
Publicado 2023