Predicting RNA secondary structure by the comparative approach: how to select the homologous sequences

por Engelen, Stéfan, Tahi, Fariza
Publicado 2007

Tfold: efficient in silico prediction of non-coding RNA secondary structures

por Engelen, Stéfan, Tahi, Fariza
Publicado 2010

BoardION: real-time monitoring of Oxford Nanopore sequencing instruments

por Bruno, Aimeric, Aury, Jean-Marc, Engelen, Stefan
Publicado 2021

Distinct co-evolution patterns of genes associated to DNA polymerase III DnaE and PolC

por Engelen, Stefan, Vallenet, David, Médigue, Claudine, Danchin, Antoine
Publicado 2012

Real-time SARS-CoV-2 diagnostic and variants tracking over multiple candidates using nanopore DNA sequencing

por Stüder, François, Petit, Jean-Louis, Engelen, Stefan, Mendoza-Parra, Marco Antonio
Publicado 2021

Joint Evolutionary Trees: A Large-Scale Method To Predict Protein Interfaces Based on Sequence Sampling

por Engelen, Stefan, Trojan, Ladislas A., Sacquin-Mora, Sophie, Lavery, Richard, Carbone, Alessandra
Publicado 2009

A double-blind randomized controlled trial comparing dexamethasone and clonidine as adjuvants to a ropivacaine sciatic popliteal block for foot surgery

por Vermeylen, Kris, De Puydt, Joris, Engelen, Stefan, Roofthooft, Eva, Soetens, Filiep, Neyrinck, Arne, Van de Velde, Marc
Publicado 2016

Genome assembly using Nanopore-guided long and error-free DNA reads

por Madoui, Mohammed-Amin, Engelen, Stefan, Cruaud, Corinne, Belser, Caroline, Bertrand, Laurie, Alberti, Adriana, Lemainque, Arnaud, Wincker, Patrick, Aury, Jean-Marc
Publicado 2015

A framework for in situ molecular characterization of coral holobionts using nanopore sequencing

por Carradec, Quentin, Poulain, Julie, Boissin, Emilie, Hume, Benjamin C. C., Voolstra, Christian R., Ziegler, Maren, Engelen, Stefan, Cruaud, Corinne, Planes, Serge, Wincker, Patrick
Publicado 2020

Author Correction: A framework for in situ molecular characterization of coral holobionts using nanopore sequencing

por Carradec, Quentin, Poulain, Julie, Boissin, Emilie, Hume, Benjamin C. C., Voolstra, Christian R., Ziegler, Maren, Engelen, Stefan, Cruaud, Corinne, Planes, Serge, Wincker, Patrick
Publicado 2021

Comparison of library preparation methods reveals their impact on interpretation of metatranscriptomic data

por Alberti, Adriana, Belser, Caroline, Engelen, Stéfan, Bertrand, Laurie, Orvain, Céline, Brinas, Laura, Cruaud, Corinne, Giraut, Laurène, Da Silva, Corinne, Firmo, Cyril, Aury, Jean-Marc, Wincker, Patrick
Publicado 2014

Transposition favors the generation of large effect mutations that may facilitate rapid adaption

por Quadrana, Leandro, Etcheverry, Mathilde, Gilly, Arthur, Caillieux, Erwann, Madoui, Mohammed-Amin, Guy, Julie, Bortolini Silveira, Amanda, Engelen, Stefan, Baillet, Victoire, Wincker, Patrick, Aury, Jean-Marc, Colot, Vincent
Publicado 2019

FORK-seq: replication landscape of the Saccharomyces cerevisiae genome by nanopore sequencing

por Hennion, Magali, Arbona, Jean-Michel, Lacroix, Laurent, Cruaud, Corinne, Theulot, Bertrand, Tallec, Benoît Le, Proux, Florence, Wu, Xia, Novikova, Elizaveta, Engelen, Stefan, Lemainque, Arnaud, Audit, Benjamin, Hyrien, Olivier
Publicado 2020

TE-Tracker: systematic identification of transposition events through whole-genome resequencing

por Gilly, Arthur, Etcheverry, Mathilde, Madoui, Mohammed-Amin, Guy, Julie, Quadrana, Leandro, Alberti, Adriana, Martin, Antoine, Heitkam, Tony, Engelen, Stefan, Labadie, Karine, Le Pen, Jeremie, Wincker, Patrick, Colot, Vincent, Aury, Jean-Marc
Publicado 2014

Genome-wide mapping of individual replication fork velocities using nanopore sequencing

por Theulot, Bertrand, Lacroix, Laurent, Arbona, Jean-Michel, Millot, Gael A., Jean, Etienne, Cruaud, Corinne, Pellet, Jade, Proux, Florence, Hennion, Magali, Engelen, Stefan, Lemainque, Arnaud, Audit, Benjamin, Hyrien, Olivier, Le Tallec, Benoît
Publicado 2022

de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer

por Istace, Benjamin, Friedrich, Anne, d'Agata, Léo, Faye, Sébastien, Payen, Emilie, Beluche, Odette, Caradec, Claudia, Davidas, Sabrina, Cruaud, Corinne, Liti, Gianni, Lemainque, Arnaud, Engelen, Stefan, Wincker, Patrick, Schacherer, Joseph, Aury, Jean-Marc
Publicado 2017

MicroScope—an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data

por Vallenet, David, Belda, Eugeni, Calteau, Alexandra, Cruveiller, Stéphane, Engelen, Stefan, Lajus, Aurélie, Le Fèvre, François, Longin, Cyrille, Mornico, Damien, Roche, David, Rouy, Zoé, Salvignol, Gregory, Scarpelli, Claude, Thil Smith, Adam Alexander, Weiman, Marion, Médigue, Claudine
Publicado 2013

Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data

por Benjelloun, Badr, Alberto, Florian J., Streeter, Ian, Boyer, Frédéric, Coissac, Eric, Stucki, Sylvie, BenBati, Mohammed, Ibnelbachyr, Mustapha, Chentouf, Mouad, Bechchari, Abdelmajid, Leempoel, Kevin, Alberti, Adriana, Engelen, Stefan, Chikhi, Abdelkader, Clarke, Laura, Flicek, Paul, Joost, Stéphane, Taberlet, Pierre, Pompanon, François
Publicado 2015

Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding

por Aury, Jean-Marc, Engelen, Stefan, Istace, Benjamin, Monat, Cécile, Lasserre-Zuber, Pauline, Belser, Caroline, Cruaud, Corinne, Rimbert, Hélène, Leroy, Philippe, Arribat, Sandrine, Dufau, Isabelle, Bellec, Arnaud, Grimbichler, David, Papon, Nathan, Paux, Etienne, Ranoux, Marion, Alberti, Adriana, Wincker, Patrick, Choulet, Frédéric
Publicado 2022

Genome evolution across 1,011 Saccharomyces cerevisiae isolates

por Peter, Jackson, De Chiara, Matteo, Friedrich, Anne, Yue, Jia-Xing, Pflieger, David, Bergström, Anders, Sigwalt, Anastasie, Barre, Benjamin, Freel, Kelle, Llored, Agnès, Cruaud, Corinne, Labadie, Karine, Aury, Jean-Marc, Istace, Benjamin, Lebrigand, Kevin, Barbry, Pascal, Engelen, Stefan, Lemainque, Arnaud, Wincker, Patrick, Liti, Gianni, Schacherer, Joseph
Publicado 2018