Mammalian MicroRNA Prediction through a Support Vector Machine Model of Sequence and Structure

por Sheng, Ying, Engström, Pär G., Lenhard, Boris
Publicado 2007

Ancora: a web resource for exploring highly conserved noncoding elements and their association with developmental regulatory genes

por Engström, Pär G, Fredman, David, Lenhard, Boris
Publicado 2008

Identification of conserved regulatory elements by comparative genome analysis

por Lenhard, Boris, Sandelin, Albin, Mendoza, Luis, Engström, Pär, Jareborg, Niclas, Wasserman, Wyeth W
Publicado 2003

RNAdb 2.0—an expanded database of mammalian non-coding RNAs

por Pang, Ken C., Stephen, Stuart, Dinger, Marcel E., Engström, Pär G., Lenhard, Boris, Mattick, John S.
Publicado 2007

Digital transcriptome profiling of normal and glioblastoma-derived neural stem cells identifies genes associated with patient survival

por Engström, Pär G, Tommei, Diva, Stricker, Stefan H, Ender, Christine, Pollard, Steven M, Bertone, Paul
Publicado 2012

Identification of functional SNPs in the 5-prime flanking sequences of human genes

por Mottagui-Tabar, Salim, Faghihi, Mohammad A, Mizuno, Yosuke, Engström, Pär G, Lenhard, Boris, Wasserman, Wyeth W, Wahlestedt, Claes
Publicado 2005

In Silico Detection of Sequence Variations Modifying Transcriptional Regulation

por Andersen, Malin C, Engström, Pär G, Lithwick, Stuart, Arenillas, David, Eriksson, Per, Lenhard, Boris, Wasserman, Wyeth W, Odeberg, Jacob
Publicado 2008

Assessment of transcript reconstruction methods for RNA-seq

por Steijger, Tamara, Abril, Josep F, Engström, Pär G, Kokocinski, Felix, Hubbard, Tim J, Guigó, Roderic, Harrow, Jennifer, Bertone, Paul
Publicado 2013

The non-coding snRNA 7SK controls transcriptional termination, poising, and bidirectionality in embryonic stem cells

por Castelo-Branco, Gonçalo, Amaral, Paulo P, Engström, Pär G, Robson, Samuel C, Marques, Sueli C, Bertone, Paul, Kouzarides, Tony
Publicado 2013

Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes

por Sandelin, Albin, Bailey, Peter, Bruce, Sara, Engström, Pär G, Klos, Joanna M, Wasserman, Wyeth W, Ericson, Johan, Lenhard, Boris
Publicado 2004

RNAdb—a comprehensive mammalian noncoding RNA database

por Pang, Ken C., Stephen, Stuart, Engström, Pär G., Tajul-Arifin, Khairina, Chen, Weisan, Wahlestedt, Claes, Lenhard, Boris, Hayashizaki, Yoshihide, Mattick, John S.
Publicado 2005

Exploring hepatic hormone actions using a compilation of gene expression profiles

por Ståhlberg, Nina, Merino, Roxana, Hernández, Luis Henríquez, Fernández-Pérez, Leandro, Sandelin, Albin, Engström, Pär, Tollet-Egnell, Petra, Lenhard, Boris, Flores-Morales, Amilcar
Publicado 2005

RNAi Screen Indicates Widespread Biological Function for Human Natural Antisense Transcripts

por Faghihi, Mohammad Ali, Kocerha, Jannet, Modarresi, Farzaneh, Engström, Pär G., Chalk, Alistair M., Brothers, Shaun P., Koesema, Eric, St. Laurent, Georges, Wahlestedt, Claes
Publicado 2010

Systematic evaluation of spliced alignment programs for RNA-seq data

por Engström, Pär G, Steijger, Tamara, Sipos, Botond, Grant, Gregory R, Kahles, André, Rätsch, Gunnar, Goldman, Nick, Hubbard, Tim J, Harrow, Jennifer, Guigó, Roderic, Bertone, Paul
Publicado 2013

A High-Content Small Molecule Screen Identifies Sensitivity of Glioblastoma Stem Cells to Inhibition of Polo-Like Kinase 1

por Danovi, Davide, Folarin, Amos, Gogolok, Sabine, Ender, Christine, Elbatsh, Ahmed M. O., Engström, Pär G., Stricker, Stefan H., Gagrica, Sladjana, Georgian, Ana, Yu, Ding, U, Kin Pong, Harvey, Kevin J., Ferretti, Patrizia, Paddison, Patrick J., Preston, Jane E., Abbott, N. Joan, Bertone, Paul, Smith, Austin, Pollard, Steven M.
Publicado 2013

Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis

por Zhu, Yafeng, Engström, Pär G., Tellgren-Roth, Christian, Baudo, Charles D., Kennell, John C., Sun, Sheng, Billmyre, R. Blake, Schröder, Markus S., Andersson, Anna, Holm, Tina, Sigurgeirsson, Benjamin, Wu, Guangxi, Sankaranarayanan, Sundar Ram, Siddharthan, Rahul, Sanyal, Kaustuv, Lundeberg, Joakim, Nystedt, Björn, Boekhout, Teun, Dawson, Thomas L., Heitman, Joseph, Scheynius, Annika, Lehtiö, Janne
Publicado 2017

Complex Loci in Human and Mouse Genomes

por Engström, Pär G, Suzuki, Harukazu, Ninomiya, Noriko, Akalin, Altuna, Sessa, Luca, Lavorgna, Giovanni, Brozzi, Alessandro, Luzi, Lucilla, Tan, Sin Lam, Yang, Liang, Kunarso, Galih, Ng, Edwin Lian-Chong, Batalov, Serge, Wahlestedt, Claes, Kai, Chikatoshi, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide, Wells, Christine, Bajic, Vladimir B, Orlando, Valerio, Reid, James F, Lenhard, Boris, Lipovich, Leonard
Publicado 2006

Transcript Annotation in FANTOM3: Mouse Gene Catalog Based on Physical cDNAs

por Maeda, Norihiro, Kasukawa, Takeya, Oyama, Rieko, Gough, Julian, Frith, Martin, Engström, Pär G, Lenhard, Boris, Aturaliya, Rajith N, Batalov, Serge, Beisel, Kirk W, Bult, Carol J, Fletcher, Colin F, Forrest, Alistair R. R, Furuno, Masaaki, Hill, David, Itoh, Masayoshi, Kanamori-Katayama, Mutsumi, Katayama, Shintaro, Katoh, Masaru, Kawashima, Tsugumi, Quackenbush, John, Ravasi, Timothy, Ring, Brian Z, Shibata, Kazuhiro, Sugiura, Koji, Takenaka, Yoichi, Teasdale, Rohan D, Wells, Christine A, Zhu, Yunxia, Kai, Chikatoshi, Kawai, Jun, Hume, David A, Carninci, Piero, Hayashizaki, Yoshihide
Publicado 2006