Benchmarking taxonomic classifiers with Illumina and Nanopore sequence data for clinical metagenomic diagnostic applications

por Govender, Kumeren N., Eyre, David W.
Publicado 2022

Probabilistic modelling of effects of antibiotics and calendar time on transmission of healthcare-associated infection

por Laager, Mirjam, Cooper, Ben S., Eyre, David W.
Publicado 2021

Use of lateral flow devices allows rapid triage of patients with SARS-CoV-2 on admission to hospital

por Young, Bernadette C., Eyre, David W., Jeffery, Katie
Publicado 2021

Algorithmic fairness and bias mitigation for clinical machine learning with deep reinforcement learning

por Yang, Jenny, Soltan, Andrew A. S., Eyre, David W., Clifton, David A.
Publicado 2023

Home-based SARS-CoV-2 lateral flow antigen testing in hospital workers

por Downs, Louise O, Eyre, David W, O'Donnell, Denise, Jeffery, Katie
Publicado 2021

K-mer based prediction of Clostridioides difficile relatedness and ribotypes

por Moore, Matthew Phillip, Wilcox, Mark H., Walker, A. Sarah, Eyre, David W.
Publicado 2022

An adversarial training framework for mitigating algorithmic biases in clinical machine learning

por Yang, Jenny, Soltan, Andrew A. S., Eyre, David W., Yang, Yang, Clifton, David A.
Publicado 2023

Probabilistic transmission models incorporating sequencing data for healthcare-associated Clostridioides difficile outperform heuristic rules and identify strain-specific differenc...

por Eyre, David W., Laager, Mirjam, Walker, A. Sarah, Cooper, Ben S., Wilson, Daniel J.
Publicado 2021

Hash-Based Core Genome Multilocus Sequence Typing for Clostridium difficile

por Eyre, David W., Peto, Tim E. A., Crook, Derrick W., Walker, A. Sarah, Wilcox, Mark H.
Publicado 2019

BugMat and FindNeighbour: command line and server applications for investigating bacterial relatedness

por Mazariegos-Canellas, Oriol, Do, Trien, Peto, Tim, Eyre, David W., Underwood, Anthony, Crook, Derrick, Wyllie, David H.
Publicado 2017

The quality of vital signs measurements and value preferences in electronic medical records varies by hospital, specialty, and patient demographics

por Jackson, Niall, Woods, Jessica, Watkinson, Peter, Brent, Andrew, Peto, Tim E. A., Walker, A. Sarah, Eyre, David W.
Publicado 2023

Genomic analysis of urogenital and rectal Neisseria meningitidis isolates reveals encapsulated hyperinvasive meningococci and coincident multidrug-resistant gonococci

por Harrison, Odile B, Cole, Kevin, Peters, Joanna, Cresswell, Fiona, Dean, Gillian, Eyre, David W, Paul, John, Maiden, Martin CJ
Publicado 2017

High precision Neisseria gonorrhoeae variant and antimicrobial resistance calling from metagenomic Nanopore sequencing

por Sanderson, Nicholas D., Swann, Jeremy, Barker, Leanne, Kavanagh, James, Hoosdally, Sarah, Crook, Derrick, Street, Teresa L., Eyre, David W.
Publicado 2020

Detection of Mixed Infection from Bacterial Whole Genome Sequence Data Allows Assessment of Its Role in Clostridium difficile Transmission

por Eyre, David W., Cule, Madeleine L., Griffiths, David, Crook, Derrick W., Peto, Tim E. A., Walker, A. Sarah, Wilson, Daniel J.
Publicado 2013

Ethnically diverse urban transmission networks of Neisseria gonorrhoeae without evidence of HIV serosorting

por Dave, Jayshree, Paul, John, Pasvol, Thomas Joshua, Williams, Andy, Warburton, Fiona, Cole, Kevin, Miari, Victoria Fotini, Stabler, Richard, Eyre, David W
Publicado 2020

Effect of Covid-19 Vaccination on Transmission of Alpha and Delta Variants

por Eyre, David W., Taylor, Donald, Purver, Mark, Chapman, David, Fowler, Tom, Pouwels, Koen B., Walker, A. Sarah, Peto, Tim E.A.
Publicado 2022

Time-of-Day Variation in SARS-CoV-2 RNA Levels during the Second Wave of COVID-19

por Zhuang, Xiaodong, Wang, Wei, Borrmann, Helene, Balfe, Peter, Matthews, Philippa C., Eyre, David W., Klerman, Elizabeth B., McKeating, Jane A.
Publicado 2022

Improving patient flow during infectious disease outbreaks using machine learning for real-time prediction of patient readiness for discharge

por Bishop, Jennifer A., Javed, Hamza A., el-Bouri, Rasheed, Zhu, Tingting, Taylor, Thomas, Peto, Tim, Watkinson, Peter, Eyre, David W., Clifton, David A.
Publicado 2021

Asymptomatic Clostridium difficile Colonisation and Onward Transmission

por Eyre, David W., Griffiths, David, Vaughan, Alison, Golubchik, Tanya, Acharya, Milind, O’Connor, Lily, Crook, Derrick W., Walker, A. Sarah, Peto, Tim E. A.
Publicado 2013

RNA polymerase mutations cause cephalosporin resistance in clinical Neisseria gonorrhoeae isolates

por Palace, Samantha G, Wang, Yi, Rubin, Daniel HF, Welsh, Michael A, Mortimer, Tatum D, Cole, Kevin, Eyre, David W, Walker, Suzanne, Grad, Yonatan H
Publicado 2020