Computational Methods to Study Human Transcript Variants in COVID-19 Infected Lung Cancer Cells

por Sun, Jiao, Fahmi, Naima Ahmed, Nassereddeen, Heba, Cheng, Sze, Martinez, Irene, Fan, Deliang, Yong, Jeongsik, Zhang, Wei
Publicado 2021

APA-Scan: detection and visualization of 3′-UTR alternative polyadenylation with RNA-seq and 3′-end-seq data

por Fahmi, Naima Ahmed, Ahmed, Khandakar Tanvir, Chang, Jae-Woong, Nassereddeen, Heba, Fan, Deliang, Yong, Jeongsik, Zhang, Wei
Publicado 2022

mTOR Contributes to the Proteome Diversity through Transcriptome-Wide Alternative Splicing

por Cheng, Sze, Fahmi, Naima Ahmed, Park, Meeyeon, Sun, Jiao, Thao, Kaitlyn, Yeh, Hsin-Sung, Zhang, Wei, Yong, Jeongsik
Publicado 2022

AS-Quant: Detection and Visualization of Alternative Splicing Events with RNA-seq Data

por Fahmi, Naima Ahmed, Nassereddeen, Heba, Chang, Jaewoong, Park, Meeyeon, Yeh, Hsinsung, Sun, Jiao, Fan, Deliang, Yong, Jeongsik, Zhang, Wei
Publicado 2021

Investigating Chaperonin-Containing TCP-1 subunit 2 as an essential component of the chaperonin complex for tumorigenesis

por Showalter, Anne E., Martini, Ana C., Nierenberg, Daniel, Hosang, Kristen, Fahmi, Naima Ahmed, Gopalan, Priya, Khaled, Amr S., Zhang, Wei, Khaled, Annette R.
Publicado 2020

mTOR-regulated U2af1 tandem exon splicing specifies transcriptome features for translational control

por Chang, Jae-Woong, Yeh, Hsin-Sung, Park, Meeyeon, Erber, Luke, Sun, Jiao, Cheng, Sze, Bui, Alexander M, Fahmi, Naima Ahmed, Nasti, Ryan, Kuang, Rui, Chen, Yue, Zhang, Wei, Yong, Jeongsik
Publicado 2019

53BP1-ACLY-SLBP-coordinated activation of replication-dependent histone biogenesis maintains genomic integrity

por Wu, TingTing, Jun, Semo, Choi, Eun-Ji, Sun, Jiao, Yang, Eun-Bi, Lee, Hyun-Seo, Kim, Sang-Yong, Fahmi, Naima Ahmed, Jiang, Qibing, Zhang, Wei, Yong, Jeongsik, Lee, Jung-Hee, You, Ho Jin
Publicado 2022

Transcriptional programming drives Ibrutinib-resistance evolution in mantle cell lymphoma

por Zhao, Xiaohong, Wang, Michelle Y., Jiang, Huijuan, Lwin, Tint, Park, Paul M., Gao, Jing, Meads, Mark B., Ren, Yuan, Li, Tao, Sun, Jiao, Fahmi, Naima Ahmed, Singh, Satishkumar, Sehgal, Lalit, Wang, Xuefeng, Silva, Ariosto S., Sotomayor, Eduardo M., Shain, Kenneth H., Cleveland, John L., Wang, Michael, Zhang, Wei, Qi, Jun, Shah, Bijal D., Tao, Jianguo
Publicado 2021