Modulation of Post-Antibiotic Bacterial Community Reassembly and Host Response by Candida albicans

por Erb Downward, John R., Falkowski, Nicole R., Mason, Katie L., Muraglia, Ryan, Huffnagle, Gary B.
Publicado 2013

Complete Genome Sequences of Pseudomonas lundensis Strains M101 and M105, Isolated from 1% Pasteurized Milk

por Ravi, Keerthikka, Erb-Downward, John R., Gammon, Natalie K., Falkowski, Nicole R., Huffnagle, Gary B.
Publicado 2021

The bacterial density of clinical rectal swabs is highly variable, correlates with sequencing contamination, and predicts patient risk of extraintestinal infection

por Chanderraj, Rishi, Brown, Christopher A., Hinkle, Kevin, Falkowski, Nicole, Woods, Robert J., Dickson, Robert P.
Publicado 2022

Reply to Yasuma et al.: Response of Lung Microbiota to Changes of Pulmonary Innate Immunity under Healthy Conditions

por Pantaleón García, Jezreel, Hinkle, Kevin J., Falkowski, Nicole R., Evans, Scott E., Dickson, Robert P.
Publicado 2021

Genome Sequences of 12 Pseudomonas lundensis Strains Isolated from the Lungs of Humans

por Scales, Brittan S., Erb-Downward, John R., Falkowski, Nicole R., LiPuma, John J., Huffnagle, Gary B.
Publicado 2018

The Psychrotrophic Pseudomonas lundensis, a Non-aeruginosa Pseudomonad, Has a Type III Secretion System of the Ysc Family, Which Is Transcriptionally Active at 37°C

por Ravi, Keerthikka, Falkowski, Nicole R., Scales, Brittan S., Akulava, Volha D., Valentovich, Leonid N., Huffnagle, Gary B.
Publicado 2022

Contribution of the Microbiome, Environment, and Genetics to Mucosal Type 2 Immunity and Anaphylaxis in a Murine Food Allergy Model

por Stark, Kelsey G., Falkowski, Nicole R., Brown, Christopher A., McDonald, Roderick A., Huffnagle, Gary B.
Publicado 2022

Gut Microbiota Predict Enterococcus Expansion but Not Vancomycin-Resistant Enterococcus Acquisition

por Chanderraj, Rishi, Brown, Christopher A., Hinkle, Kevin, Falkowski, Nicole, Ranjan, Piyush, Dickson, Robert P., Woods, Robert J.
Publicado 2020

Bacterial Topography of the Healthy Human Lower Respiratory Tract

por Dickson, Robert P., Erb-Downward, John R., Freeman, Christine M., McCloskey, Lisa, Falkowski, Nicole R., Huffnagle, Gary B., Curtis, Jeffrey L.
Publicado 2017

Whole lung tissue is the preferred sampling method for amplicon-based characterization of murine lung microbiota

por Baker, Jennifer M., Hinkle, Kevin J., McDonald, Roderick A., Brown, Christopher A., Falkowski, Nicole R., Huffnagle, Gary B., Dickson, Robert P.
Publicado 2021

Correction to: Whole lung tissue is the preferred sampling method for amplicon-based characterization of murine lung microbiota

por Baker, Jennifer M., Hinkle, Kevin J., McDonald, Roderick A., Brown, Christopher A., Falkowski, Nicole R., Huffnagle, Gary B., Dickson, Robert P.
Publicado 2021

A steroid‐resistant cockroach allergen model is associated with lung and cecal microbiome changes

por Asai, Nobuhiro, Ethridge, Alexander D., Fonseca, Wendy, Yagi, Kazuma, Rasky, Andrew J., Morris, Susan B., Falkowski, Nicole R., Huang, Yvonne J., Huffnagle, Gary B., Lukacs, Nicholas W.
Publicado 2023

Antibiotics cause metabolic changes in mice primarily through microbiome modulation rather than behavioral changes

por Bongers, Kale S., McDonald, Roderick A., Winner, Katherine M., Falkowski, Nicole R., Brown, Christopher A., Baker, Jennifer M., Hinkle, Kevin J., Fergle, Daniel J., Dickson, Robert P.
Publicado 2022

The Systemic Inflammatory Response to Clostridium difficile Infection

por Rao, Krishna, Erb-Downward, John R., Walk, Seth T., Micic, Dejan, Falkowski, Nicole, Santhosh, Kavitha, Mogle, Jill A., Ring, Cathrin, Young, Vincent B., Huffnagle, Gary B., Aronoff, David M.
Publicado 2014

In critically ill patients, anti-anaerobic antibiotics increase risk of adverse clinical outcomes

por Chanderraj, Rishi, Baker, Jennifer M., Kay, Stephen G., Brown, Christopher A., Hinkle, Kevin J., Fergle, Daniel J., McDonald, Roderick A., Falkowski, Nicole R., Metcalf, Joseph D., Kaye, Keith S., Woods, Robert J., Prescott, Hallie C., Sjoding, Michael W., Dickson, Robert P.
Publicado 2023

Critical Relevance of Stochastic Effects on Low-Bacterial-Biomass 16S rRNA Gene Analysis

por Erb-Downward, John R., Falkowski, Nicole R., D’Souza, Jennifer C., McCloskey, Lisa M., McDonald, Roderick A., Brown, Christopher A., Shedden, Kerby, Dickson, Robert P., Freeman, Christine M., Stringer, Kathleen A., Foxman, Betsy, Huffnagle, Gary B., Curtis, Jeffrey L., Adar, Sara D.
Publicado 2020