Identification of the conjugative and mobilizable plasmid fragments in the plasmidome using sequence signatures

por Fang, Zhencheng, Zhou, Hongwei
Publicado 2020

VirionFinder: Identification of Complete and Partial Prokaryote Virus Virion Protein From Virome Data Using the Sequence and Biochemical Properties of Amino Acids

por Fang, Zhencheng, Zhou, Hongwei
Publicado 2021

Corrigendum: VirionFinder: Identification of Complete and Partial Prokaryote Virus Virion Protein From Virome Data Using the Sequence and Biochemical Properties of Amino Acids

por Fang, Zhencheng, Zhou, Hongwei
Publicado 2022

DeePVP: Identification and classification of phage virion proteins using deep learning

por Fang, Zhencheng, Feng, Tao, Zhou, Hongwei, Chen, Muxuan
Publicado 2022

HoPhage: an ab initio tool for identifying hosts of phage fragments from metaviromes

por Tan, Jie, Fang, Zhencheng, Wu, Shufang, Guo, Qian, Jiang, Xiaoqing, Zhu, Huaiqiu
Publicado 2021

PPR-Meta: a tool for identifying phages and plasmids from metagenomic fragments using deep learning

por Fang, Zhencheng, Tan, Jie, Wu, Shufang, Li, Mo, Xu, Congmin, Xie, Zhongjie, Zhu, Huaiqiu
Publicado 2019

PlasGUN: gene prediction in plasmid metagenomic short reads using deep learning

por Fang, Zhencheng, Tan, Jie, Wu, Shufang, Li, Mo, Wang, Chunhui, Liu, Yongchu, Zhu, Huaiqiu
Publicado 2020

DeePhage: distinguishing virulent and temperate phage-derived sequences in metavirome data with a deep learning approach

por Wu, Shufang, Fang, Zhencheng, Tan, Jie, Li, Mo, Wang, Chunhui, Guo, Qian, Xu, Congmin, Jiang, Xiaoqing, Zhu, Huaiqiu
Publicado 2021

Predicting hosts based on early SARS-CoV-2 samples and analyzing the 2020 pandemic

por Guo, Qian, Li, Mo, Wang, Chunhui, Guo, Jinyuan, Jiang, Xiaoqing, Tan, Jie, Wu, Shufang, Wang, Peihong, Xiao, Tingting, Zhou, Man, Fang, Zhencheng, Xiao, Yonghong, Zhu, Huaiqiu
Publicado 2021

More Positive or More Negative? Metagenomic Analysis Reveals Roles of Virome in Human Disease-Related Gut Microbiome

por Li, Mo, Wang, Chunhui, Guo, Qian, Xu, Congmin, Xie, Zhongjie, Tan, Jie, Wu, Shufang, Wang, Peihong, Guo, Jinyuan, Fang, Zhencheng, Zhu, Shiwei, Duan, Liping, Jiang, Xiaoqing, Zhu, Huaiqiu
Publicado 2022