TEMPy: a Python library for assessment of three-dimensional electron microscopy density fits

por Farabella, Irene, Vasishtan, Daven, Joseph, Agnel Praveen, Pandurangan, Arun Prasad, Sahota, Harpal, Topf, Maya
Publicado 2015

Hierarchical chromatin organization detected by TADpole

por Soler-Vila, Paula, Cuscó, Pol, Farabella, Irene, Di Stefano, Marco, Marti-Renom, Marc A
Publicado 2020

3D reconstruction of genomic regions from sparse interaction data

por Mendieta-Esteban, Julen, Di Stefano, Marco, Castillo, David, Farabella, Irene, Marti-Renom, Marc A
Publicado 2021

Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins

por Atherton, Joseph, Farabella, Irene, Yu, I-Mei, Rosenfeld, Steven S, Houdusse, Anne, Topf, Maya, Moores, Carolyn A
Publicado 2014

Transcriptional activation during cell reprogramming correlates with the formation of 3D open chromatin hubs

por Di Stefano, Marco, Stadhouders, Ralph, Farabella, Irene, Castillo, David, Serra, François, Graf, Thomas, Marti-Renom, Marc A.
Publicado 2020

Allosteric signalling in the outer membrane translocation domain of PapC usher

por Farabella, Irene, Pham, Thieng, Henderson, Nadine S, Geibel, Sebastian, Phan, Gilles, Thanassi, David G, Delcour, Anne H, Waksman, Gabriel, Topf, Maya
Publicado 2014

Correction: Allosteric signalling in the outer membrane translocation domain of PapC usher

por Farabella, Irene, Pham, Thieng, Henderson, Nadine S, Geibel, Sebastian, Phan, Gilles, Thanassi, David G, Delcour, Anne H, Waksman, Gabriel, Topf, Maya
Publicado 2016

Zinc Binding to the Tyr402 and His402 Allotypes of Complement Factor H: Possible Implications for Age-Related Macular Degeneration

por Nan, Ruodan, Farabella, Irene, Schumacher, Felix F., Miller, Ami, Gor, Jayesh, Martin, Andrew C.R., Jones, David T., Lengyel, Imre, Perkins, Stephen J.
Publicado 2011

Correction: Stepwise visualization of membrane pore formation by suilysin, a bacterial cholesterol-dependent cytolysin

por Leung, Carl, Dudkina, Natalya V, Lukoyanova, Natalya, Hodel, Adrian W, Farabella, Irene, Pandurangan, Arun P, Jahan, Nasrin, Damaso, Mafalda Pires, Osmanović, Dino, Reboul, Cyril F, Dunstone, Michelle A, Andrew, Peter W, Lonnen, Rana, Topf, Maya, Saibil, Helen R, Hoogenboom, Bart W
Publicado 2015

Stepwise visualization of membrane pore formation by suilysin, a bacterial cholesterol-dependent cytolysin

por Leung, Carl, Dudkina, Natalya V, Lukoyanova, Natalya, Hodel, Adrian W, Farabella, Irene, Pandurangan, Arun P, Jahan, Nasrin, Pires Damaso, Mafalda, Osmanović, Dino, Reboul, Cyril F, Dunstone, Michelle A, Andrew, Peter W, Lonnen, Rana, Topf, Maya, Saibil, Helen R, Hoogenboom, Bart W
Publicado 2014

Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation

por Vilarrasa-Blasi, Roser, Soler-Vila, Paula, Verdaguer-Dot, Núria, Russiñol, Núria, Di Stefano, Marco, Chapaprieta, Vicente, Clot, Guillem, Farabella, Irene, Cuscó, Pol, Kulis, Marta, Agirre, Xabier, Prosper, Felipe, Beekman, Renée, Beà, Silvia, Colomer, Dolors, Stunnenberg, Hendrik G., Gut, Ivo, Campo, Elias, Marti-Renom, Marc A., Martin-Subero, José Ignacio
Publicado 2021

Conformational Changes during Pore Formation by the Perforin-Related Protein Pleurotolysin

por Lukoyanova, Natalya, Kondos, Stephanie C., Farabella, Irene, Law, Ruby H. P., Reboul, Cyril F., Caradoc-Davies, Tom T., Spicer, Bradley A., Kleifeld, Oded, Traore, Daouda A. K., Ekkel, Susan M., Voskoboinik, Ilia, Trapani, Joseph A., Hatfaludi, Tamas, Oliver, Katherine, Hotze, Eileen M., Tweten, Rodney K., Whisstock, James C., Topf, Maya, Saibil, Helen R., Dunstone, Michelle A.
Publicado 2015

Chromatin alternates between A and B compartments at kilobase scale for subgenic organization

por Harris, Hannah L., Gu, Huiya, Olshansky, Moshe, Wang, Ailun, Farabella, Irene, Eliaz, Yossi, Kalluchi, Achyuth, Krishna, Akshay, Jacobs, Mozes, Cauer, Gesine, Pham, Melanie, Rao, Suhas S. P., Dudchenko, Olga, Omer, Arina, Mohajeri, Kiana, Kim, Sungjae, Nichols, Michael H., Davis, Eric S., Gkountaroulis, Dimos, Udupa, Devika, Aiden, Aviva Presser, Corces, Victor G., Phanstiel, Douglas H., Noble, William Stafford, Nir, Guy, Di Pierro, Michele, Seo, Jeong-Sun, Talkowski, Michael E., Aiden, Erez Lieberman, Rowley, M. Jordan
Publicado 2023

Mutations in SLC12A5 in epilepsy of infancy with migrating focal seizures

por Stödberg, Tommy, McTague, Amy, Ruiz, Arnaud J., Hirata, Hiromi, Zhen, Juan, Long, Philip, Farabella, Irene, Meyer, Esther, Kawahara, Atsuo, Vassallo, Grace, Stivaros, Stavros M., Bjursell, Magnus K., Stranneheim, Henrik, Tigerschiöld, Stephanie, Persson, Bengt, Bangash, Iftikhar, Das, Krishna, Hughes, Deborah, Lesko, Nicole, Lundeberg, Joakim, Scott, Rod C., Poduri, Annapurna, Scheffer, Ingrid E., Smith, Holly, Gissen, Paul, Schorge, Stephanie, Reith, Maarten E. A., Topf, Maya, Kullmann, Dimitri M., Harvey, Robert J., Wedell, Anna, Kurian, Manju A.
Publicado 2015

Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling

por Nir, Guy, Farabella, Irene, Pérez Estrada, Cynthia, Ebeling, Carl G., Beliveau, Brian J., Sasaki, Hiroshi M., Lee, S. Dean, Nguyen, Son C., McCole, Ruth B., Chattoraj, Shyamtanu, Erceg, Jelena, AlHaj Abed, Jumana, Martins, Nuno M. C., Nguyen, Huy Q., Hannan, Mohammed A., Russell, Sheikh, Durand, Neva C., Rao, Suhas S. P., Kishi, Jocelyn Y., Soler-Vila, Paula, Di Pierro, Michele, Onuchic, José N., Callahan, Steven P., Schreiner, John M., Stuckey, Jeff A., Yin, Peng, Aiden, Erez Lieberman, Marti-Renom, Marc A., Wu, C.-ting
Publicado 2018

MED27, SLC6A7, and MPPE1 Variants in a Complex Neurodevelopmental Disorder with Severe Dystonia

por Reid, Kimberley M., Spaull, Robert, Salian, Smrithi, Barwick, Katy, Meyer, Esther, Zhen, Juan, Hirata, Hiromi, Sheipouri, Diba, Benkerroum, Hind, Gorman, Kathleen M., Papandreou, Apostolos, Simpson, Michael A., Hirano, Yoshinobu, Farabella, Irene, Topf, Maya, Grozeva, Detelina, Carss, Keren, Smith, Martin, Pall, Hardev, Lunt, Peter, De Gressi, Susanna, Kamsteeg, Erik‐Jan, Haack, Tobias B., Carr, Lucinda, Guerreiro, Rita, Bras, Jose, Maher, Eamonn R., Scott, Richard H., Vandenberg, Robert J., Raymond, F. Lucy, Chong, Wui K., Sudhakar, Sniya, Mankad, Kshitij, Reith, Maarten E., Campeau, Philippe M., Harvey, Robert J., Kurian, Manju A.
Publicado 2022