Cell Layers: uncovering clustering structure in unsupervised single-cell transcriptomic analysis

por Blair, Andrew P, Hu, Robert K, Farah, Elie N, Chi, Neil C, Pollard, Katherine S, Przytycki, Pawel F, Kathiriya, Irfan S, Bruneau, Benoit G
Publicado 2022

mRNAs and lncRNAs intrinsically form secondary structures with short end-to-end distances

por Lai, Wan-Jung C., Kayedkhordeh, Mohammad, Cornell, Erica V., Farah, Elie, Bellaousov, Stanislav, Rietmeijer, Robert, Salsi, Enea, Mathews, David H., Ermolenko, Dmitri N.
Publicado 2018

Cardiac cell type–specific gene regulatory programs and disease risk association

por Hocker, James D., Poirion, Olivier B., Zhu, Fugui, Buchanan, Justin, Zhang, Kai, Chiou, Joshua, Wang, Tsui-Min, Zhang, Qingquan, Hou, Xiaomeng, Li, Yang E., Zhang, Yanxiao, Farah, Elie N., Wang, Allen, McCulloch, Andrew D., Gaulton, Kyle J., Ren, Bing, Chi, Neil C., Preissl, Sebastian
Publicado 2021

Transcriptionally Active HERV-H Retrotransposons Demarcate Topologically Associating Domains in Human Pluripotent Stem Cells

por Zhang, Yanxiao, Li, Ting, Preissl, Sebastian, Amaral, Maria Luisa, Grinstein, Jonathan, Farah, Elie N., Destici, Eugin, Qiu, Yunjiang, Hu, Rong, Lee, Ah Young, Chee, Sora, Ma, Kaiyue, Ye, Zhen, Zhu, Quan, Huang, Hui, Fang, Rongxin, Yu, Leqian, Belmonte, Juan Carlos Izpisua, Wu, Jun, Evans, Sylvia M., Chi, Neil C., Ren, Bing
Publicado 2019

Cell-Surface Marker Signature for Enrichment of Ventricular Cardiomyocytes Derived from Human Embryonic Stem Cells

por Veevers, Jennifer, Farah, Elie N., Corselli, Mirko, Witty, Alec D., Palomares, Karina, Vidal, Jason G., Emre, Nil, Carson, Christian T., Ouyang, Kunfu, Liu, Canzhao, van Vliet, Patrick, Zhu, Maggie, Hegarty, Jeffrey M., Deacon, Dekker C., Grinstein, Jonathan D., Dirschinger, Ralf J., Frazer, Kelly A., Adler, Eric D., Knowlton, Kirk U., Chi, Neil C., Martin, Jody C., Chen, Ju, Evans, Sylvia M.
Publicado 2018