Pseudotime Analysis Reveals Exponential Trends in DNA Methylation Aging with Mortality Associated Timescales

por Lapborisuth, Kalsuda, Farrell, Colin, Pellegrini, Matteo
Publicado 2022

BiSulfite Bolt: A bisulfite sequencing analysis platform

por Farrell, Colin, Thompson, Michael, Tosevska, Anela, Oyetunde, Adewale, Pellegrini, Matteo
Publicado 2021

Cardiac fibroblast proliferation rates and collagen expression mature early and are unaltered with advancing age

por Wu, Rimao, Ma, Feiyang, Tosevska, Anela, Farrell, Colin, Pellegrini, Matteo, Deb, Arjun
Publicado 2020

A complex network of interactions governs DNA methylation at telomeric regions

por Farrell, Colin, Vaquero-Sedas, María I, Cubiles, María D, Thompson, Michael, Vega-Vaquero, Alejandro, Pellegrini, Matteo, Vega-Palas, Miguel A
Publicado 2022

72399 Epigenetic Modification of Macrophages Contribute to Protective Memory in Against Staphylococcus aureus

por Pellegrini, Mateo, Chan, Liana C., Farrell, Colin, Filler, Scott G., Lee, Hong, Fowler, Vance G., Reed, Elaine F., Yeaman, Michael R.
Publicado 2021

ABCB6 polymorphisms are not overly represented in patients with porphyria

por Farrell, Colin P., Nicolas, Gäel, Desnick, Robert J., Parker, Charles J., Lamoril, Jerome, Gouya, Laurent, Karim, Zoubida, Tchernitchko, Dimitri, Chan, Brenden, Puy, Herve, Phillips, John D.
Publicado 2022

Hibernation slows epigenetic ageing in yellow-bellied marmots

por Pinho, Gabriela M., Martin, Julien G. A., Farrell, Colin, Haghani, Amin, Zoller, Joseph A., Zhang, Joshua, Snir, Sagi, Pellegrini, Matteo, Wayne, Robert K., Blumstein, Daniel T., Horvath, Steve
Publicado 2022

Metal content and kinetic properties of yeast RNA lariat debranching enzyme Dbr1

por Clark, Nathaniel E., Katolik, Adam, Taggart, Allison J., Buerer, Luke, Holloway, Stephen P., Miller, Nathaniel, Phillips, John D., Farrell, Colin P., Damha, Masad J., Fairbrother, William G.
Publicado 2022

The D519G Polymorphism of Glyceronephosphate O-Acyltransferase Is a Risk Factor for Familial Porphyria Cutanea Tarda

por Farrell, Colin P., Overbey, Jessica R., Naik, Hetanshi, Nance, Danielle, McLaren, Gordon D., McLaren, Christine E., Zhou, Luming, Desnick, Robert J., Parker, Charles J., Phillips, John D.
Publicado 2016

A rat epigenetic clock recapitulates phenotypic aging and co-localizes with heterochromatin

por Levine, Morgan, McDevitt, Ross A, Meer, Margarita, Perdue, Kathy, Di Francesco, Andrea, Meade, Theresa, Farrell, Colin, Thrush, Kyra, Wang, Meng, Dunn, Christopher, Pellegrini, Matteo, de Cabo, Rafael, Ferrucci, Luigi
Publicado 2020

Epigenetic models developed for plains zebras predict age in domestic horses and endangered equids

por Larison, Brenda, Pinho, Gabriela M., Haghani, Amin, Zoller, Joseph A., Li, Caesar Z., Finno, Carrie J., Farrell, Colin, Kaelin, Christopher B., Barsh, Gregory S., Wooding, Bernard, Robeck, Todd R., Maddox, Dewey, Pellegrini, Matteo, Horvath, Steve
Publicado 2021

Biological variation in the sizes, shapes and locations of visual cortical areas in the mouse

por Waters, Jack, Lee, Eric, Gaudreault, Nathalie, Griffin, Fiona, Lecoq, Jerome, Slaughterbeck, Cliff, Sullivan, David, Farrell, Colin, Perkins, Jed, Reid, David, Feng, David, Graddis, Nile, Garrett, Marina, Li, Yang, Long, Fuhui, Mochizuki, Chris, Roll, Kate, Zhuang, Jun, Thompson, Carol
Publicado 2019

DNA Methylation-Based Prediction of Post-operative Atrial Fibrillation

por Fischer, Matthew A., Mahajan, Aman, Cabaj, Maximilian, Kimball, Todd H., Morselli, Marco, Soehalim, Elizabeth, Chapski, Douglas J., Montoya, Dennis, Farrell, Colin P., Scovotti, Jennifer, Bueno, Claudia T., Mimila, Naomi A., Shemin, Richard J., Elashoff, David, Pellegrini, Matteo, Monte, Emma, Vondriska, Thomas M.
Publicado 2022

Genome-wide CRISPR-Cas9 Screening Reveals Ubiquitous T cell Cancer Targeting via the monomorphic MHC class I related protein MR1

por Crowther, Michael D., Dolton, Garry, Legut, Mateusz, Caillaud, Marine E., Lloyd, Angharad, Attaf, Meriem, Galloway, Sarah A. E., Rius, Cristina, Farrell, Colin P., Szomolay, Barbara, Ager, Ann, Parker, Alan L., Fuller, Anna, Donia, Marco, McCluskey, James, Rossjohn, Jamie, Svane, Inge Marie, Phillips, John, Sewell, Andrew K.
Publicado 2020

A petascale automated imaging pipeline for mapping neuronal circuits with high-throughput transmission electron microscopy

por Yin, Wenjing, Brittain, Derrick, Borseth, Jay, Scott, Marie E., Williams, Derric, Perkins, Jedediah, Own, Christopher S., Murfitt, Matthew, Torres, Russel M., Kapner, Daniel, Mahalingam, Gayathri, Bleckert, Adam, Castelli, Daniel, Reid, David, Lee, Wei-Chung Allen, Graham, Brett J., Takeno, Marc, Bumbarger, Daniel J., Farrell, Colin, Reid, R. Clay, da Costa, Nuno Macarico
Publicado 2020

Metabolic reprogramming and epigenetic changes of vital organs in SARS-CoV-2–induced systemic toxicity

por Li, Shen, Ma, Feiyang, Yokota, Tomohiro, Garcia, Gustavo, Palermo, Amelia, Wang, Yijie, Farrell, Colin, Wang, Yu-Chen, Wu, Rimao, Zhou, Zhiqiang, Pan, Calvin, Morselli, Marco, Teitell, Michael A., Ryazantsev, Sergey, Fishbein, Gregory A., Hoeve, Johanna ten, Arboleda, Valerie A., Bloom, Joshua, Dillon, Barbara, Pellegrini, Matteo, Lusis, Aldons J., Graeber, Thomas G., Arumugaswami, Vaithilingaraja, Deb, Arjun
Publicado 2021

A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain

por Yao, Zizhen, van Velthoven, Cindy T. J., Kunst, Michael, Zhang, Meng, McMillen, Delissa, Lee, Changkyu, Jung, Won, Goldy, Jeff, Abdelhak, Aliya, Baker, Pamela, Barkan, Eliza, Bertagnolli, Darren, Campos, Jazmin, Carey, Daniel, Casper, Tamara, Chakka, Anish Bhaswanth, Chakrabarty, Rushil, Chavan, Sakshi, Chen, Min, Clark, Michael, Close, Jennie, Crichton, Kirsten, Daniel, Scott, Dolbeare, Tim, Ellingwood, Lauren, Gee, James, Glandon, Alexandra, Gloe, Jessica, Gould, Joshua, Gray, James, Guilford, Nathan, Guzman, Junitta, Hirschstein, Daniel, Ho, Windy, Jin, Kelly, Kroll, Matthew, Lathia, Kanan, Leon, Arielle, Long, Brian, Maltzer, Zoe, Martin, Naomi, McCue, Rachel, Meyerdierks, Emma, Nguyen, Thuc Nghi, Pham, Trangthanh, Rimorin, Christine, Ruiz, Augustin, Shapovalova, Nadiya, Slaughterbeck, Cliff, Sulc, Josef, Tieu, Michael, Torkelson, Amy, Tung, Herman, Cuevas, Nasmil Valera, Wadhwani, Katherine, Ward, Katelyn, Levi, Boaz, Farrell, Colin, Thompson, Carol L., Mufti, Shoaib, Pagan, Chelsea M., Kruse, Lauren, Dee, Nick, Sunkin, Susan M., Esposito, Luke, Hawrylycz, Michael J., Waters, Jack, Ng, Lydia, Smith, Kimberly A., Tasic, Bosiljka, Zhuang, Xiaowei, Zeng, Hongkui
Publicado 2023

A large-scale standardized physiological survey reveals functional organization of the mouse visual cortex

por de Vries, Saskia E. J., Lecoq, Jerome A., Buice, Michael A., Groblewski, Peter A., Ocker, Gabriel K., Oliver, Michael, Feng, David, Cain, Nicholas, Ledochowitsch, Peter, Millman, Daniel, Roll, Kate, Garrett, Marina, Keenan, Tom, Kuan, Leonard, Mihalas, Stefan, Olsen, Shawn, Thompson, Carol, Wakeman, Wayne, Waters, Jack, Williams, Derric, Barber, Chris, Berbesque, Nathan, Blanchard, Brandon, Bowles, Nicholas, Caldejon, Shiella D., Casal, Linzy, Cho, Andrew, Cross, Sissy, Dang, Chinh, Dolbeare, Tim, Edwards, Melise, Galbraith, John, Gaudreault, Nathalie, Gilbert, Terri L., Griffin, Fiona, Hargrave, Perry, Howard, Robert, Huang, Lawrence, Jewell, Sean, Keller, Nika, Knoblich, Ulf, Larkin, Josh D., Larsen, Rachael, Lau, Chris, Lee, Eric, Lee, Felix, Leon, Arielle, Li, Lu, Long, Fuhui, Luviano, Jennifer, Mace, Kyla, Nguyen, Thuyanh, Perkins, Jed, Robertson, Miranda, Seid, Sam, Shea-Brown, Eric, Shi, Jianghong, Sjoquist, Nathan, Slaughterbeck, Cliff, Sullivan, David, Valenza, Ryan, White, Casey, Williford, Ali, Witten, Daniela M., Zhuang, Jun, Zeng, Hongkui, Farrell, Colin, Ng, Lydia, Bernard, Amy, Phillips, John W., Reid, R. Clay, Koch, Christof
Publicado 2019

Human neocortical expansion involves glutamatergic neuron diversification

por Berg, Jim, Sorensen, Staci A., Ting, Jonathan T., Miller, Jeremy A., Chartrand, Thomas, Buchin, Anatoly, Bakken, Trygve E., Budzillo, Agata, Dee, Nick, Ding, Song-Lin, Gouwens, Nathan W., Hodge, Rebecca D., Kalmbach, Brian, Lee, Changkyu, Lee, Brian R., Alfiler, Lauren, Baker, Katherine, Barkan, Eliza, Beller, Allison, Berry, Kyla, Bertagnolli, Darren, Bickley, Kris, Bomben, Jasmine, Braun, Thomas, Brouner, Krissy, Casper, Tamara, Chong, Peter, Crichton, Kirsten, Dalley, Rachel, de Frates, Rebecca, Desta, Tsega, Lee, Samuel Dingman, D’Orazi, Florence, Dotson, Nadezhda, Egdorf, Tom, Enstrom, Rachel, Farrell, Colin, Feng, David, Fong, Olivia, Furdan, Szabina, Galakhova, Anna A., Gamlin, Clare, Gary, Amanda, Glandon, Alexandra, Goldy, Jeff, Gorham, Melissa, Goriounova, Natalia A., Gratiy, Sergey, Graybuck, Lucas, Gu, Hong, Hadley, Kristen, Hansen, Nathan, Heistek, Tim S., Henry, Alex M., Heyer, Djai B., Hill, DiJon, Hill, Chris, Hupp, Madie, Jarsky, Tim, Kebede, Sara, Keene, Lisa, Kim, Lisa, Kim, Mean-Hwan, Kroll, Matthew, Latimer, Caitlin, Levi, Boaz P., Link, Katherine E., Mallory, Matthew, Mann, Rusty, Marshall, Desiree, Maxwell, Michelle, McGraw, Medea, McMillen, Delissa, Melief, Erica, Mertens, Eline J., Mezei, Leona, Mihut, Norbert, Mok, Stephanie, Molnar, Gabor, Mukora, Alice, Ng, Lindsay, Ngo, Kiet, Nicovich, Philip R., Nyhus, Julie, Olah, Gaspar, Oldre, Aaron, Omstead, Victoria, Ozsvar, Attila, Park, Daniel, Peng, Hanchuan, Pham, Trangthanh, Pom, Christina A., Potekhina, Lydia, Rajanbabu, Ramkumar, Ransford, Shea, Reid, David, Rimorin, Christine, Ruiz, Augustin, Sandman, David, Sulc, Josef, Sunkin, Susan M., Szafer, Aaron, Szemenyei, Viktor, Thomsen, Elliot R., Tieu, Michael, Torkelson, Amy, Trinh, Jessica, Tung, Herman, Wakeman, Wayne, Waleboer, Femke, Ward, Katelyn, Wilbers, René, Williams, Grace, Yao, Zizhen, Yoon, Jae-Geun, Anastassiou, Costas, Arkhipov, Anton, Barzo, Pal, Bernard, Amy, Cobbs, Charles, de Witt Hamer, Philip C., Ellenbogen, Richard G., Esposito, Luke, Ferreira, Manuel, Gwinn, Ryder P., Hawrylycz, Michael J., Hof, Patrick R., Idema, Sander, Jones, Allan R., Keene, C. Dirk, Ko, Andrew L., Murphy, Gabe J., Ng, Lydia, Ojemann, Jeffrey G., Patel, Anoop P., Phillips, John W., Silbergeld, Daniel L., Smith, Kimberly, Tasic, Bosiljka, Yuste, Rafael, Segev, Idan, de Kock, Christiaan P. J., Mansvelder, Huibert D., Tamas, Gabor, Zeng, Hongkui, Koch, Christof, Lein, Ed S.
Publicado 2021

Author Correction: Human neocortical expansion involves glutamatergic neuron diversification

por Berg, Jim, Sorensen, Staci A., Ting, Jonathan T., Miller, Jeremy A., Chartrand, Thomas, Buchin, Anatoly, Bakken, Trygve E., Budzillo, Agata, Dee, Nick, Ding, Song-Lin, Gouwens, Nathan W., Hodge, Rebecca D., Kalmbach, Brian, Lee, Changkyu, Lee, Brian R., Alfiler, Lauren, Baker, Katherine, Barkan, Eliza, Beller, Allison, Berry, Kyla, Bertagnolli, Darren, Bickley, Kris, Bomben, Jasmine, Braun, Thomas, Brouner, Krissy, Casper, Tamara, Chong, Peter, Crichton, Kirsten, Dalley, Rachel, de Frates, Rebecca, Desta, Tsega, Lee, Samuel Dingman, D’Orazi, Florence, Dotson, Nadezhda, Egdorf, Tom, Enstrom, Rachel, Farrell, Colin, Feng, David, Fong, Olivia, Furdan, Szabina, Galakhova, Anna A., Gamlin, Clare, Gary, Amanda, Glandon, Alexandra, Goldy, Jeff, Gorham, Melissa, Goriounova, Natalia A., Gratiy, Sergey, Graybuck, Lucas, Gu, Hong, Hadley, Kristen, Hansen, Nathan, Heistek, Tim S., Henry, Alex M., Heyer, Djai B., Hill, DiJon, Hill, Chris, Hupp, Madie, Jarsky, Tim, Kebede, Sara, Keene, Lisa, Kim, Lisa, Kim, Mean-Hwan, Kroll, Matthew, Latimer, Caitlin, Levi, Boaz P., Link, Katherine E., Mallory, Matthew, Mann, Rusty, Marshall, Desiree, Maxwell, Michelle, McGraw, Medea, McMillen, Delissa, Melief, Erica, Mertens, Eline J., Mezei, Leona, Mihut, Norbert, Mok, Stephanie, Molnar, Gabor, Mukora, Alice, Ng, Lindsay, Ngo, Kiet, Nicovich, Philip R., Nyhus, Julie, Olah, Gaspar, Oldre, Aaron, Omstead, Victoria, Ozsvar, Attila, Park, Daniel, Peng, Hanchuan, Pham, Trangthanh, Pom, Christina A., Potekhina, Lydia, Rajanbabu, Ramkumar, Ransford, Shea, Reid, David, Rimorin, Christine, Ruiz, Augustin, Sandman, David, Sulc, Josef, Sunkin, Susan M., Szafer, Aaron, Szemenyei, Viktor, Thomsen, Elliot R., Tieu, Michael, Torkelson, Amy, Trinh, Jessica, Tung, Herman, Wakeman, Wayne, Waleboer, Femke, Ward, Katelyn, Wilbers, René, Williams, Grace, Yao, Zizhen, Yoon, Jae-Geun, Anastassiou, Costas, Arkhipov, Anton, Barzo, Pal, Bernard, Amy, Cobbs, Charles, de Witt Hamer, Philip C., Ellenbogen, Richard G., Esposito, Luke, Ferreira, Manuel, Gwinn, Ryder P., Hawrylycz, Michael J., Hof, Patrick R., Idema, Sander, Jones, Allan R., Keene, C. Dirk, Ko, Andrew L., Murphy, Gabe J., Ng, Lydia, Ojemann, Jeffrey G., Patel, Anoop P., Phillips, John W., Silbergeld, Daniel L., Smith, Kimberly, Tasic, Bosiljka, Yuste, Rafael, Segev, Idan, de Kock, Christiaan P. J., Mansvelder, Huibert D., Tamas, Gabor, Zeng, Hongkui, Koch, Christof, Lein, Ed S.
Publicado 2022