Differential Integration of Transcriptome and Proteome Identifies Pan-Cancer Prognostic Biomarkers

por Schwartz, Gregory W., Petrovic, Jelena, Zhou, Yeqiao, Faryabi, Robert B.
Publicado 2018

TooManyPeaks identifies drug-resistant-specific regulatory elements from single-cell leukemic epigenomes

por Schwartz, Gregory W., Zhou, Yeqiao, Petrovic, Jelena, Pear, Warren S., Faryabi, Robert B.
Publicado 2021

TooManyCells identifies and visualizes relationships of single-cell clades

por Schwartz, Gregory W., Zhou, Yeqiao, Petrovic, Jelena, Fasolino, Maria, Xu, Lanwei, Shaffer, Sydney M., Pear, Warren S., Vahedi, Golnaz, Faryabi, Robert B.
Publicado 2020

Trib2 Suppresses Tumor Initiation in Notch-Driven T-ALL

por Stein, Sarah J., Mack, Ethan A., Rome, Kelly S., Pajcini, Kostandin V., Ohtani, Takuya, Xu, Lanwei, Li, Yunlei, Meijerink, Jules P. P., Faryabi, Robert B., Pear, Warren S.
Publicado 2016

AnnoSpat annotates cell types and quantifies cellular arrangements from spatial proteomics

por Mongia, Aanchal, Saunders, Diane C., Wang, Yue J., Brissova, Marcela, Powers, Alvin C., Kaestner, Klaus H., Vahedi, Golnaz, Naji, Ali, Schwartz, Gregory W., Faryabi, Robert B.
Publicado 2023

The pseudokinase Trib1 regulates the transition of exhausted T cells to a KLR(+) CD8(+) effector state, and its deletion improves checkpoint blockade

por McClory, Susan E., Bardhan, Oishi, Rome, Kelly S., Giles, Josephine R., Baxter, Amy E., Xu, Lanwei, Gimotty, Phyllis A., Faryabi, Robert B., John Wherry, E., Pear, Warren S., Jordan, Martha S.
Publicado 2023

The pseudokinase Trib1 regulates the transition of exhausted T cells to a KLR(+) CD8(+) effector state and its deletion improves checkpoint blockade

por McClory, Susan E., Bardhan, Oishi, Rome, Kelly S., Giles, Josephine R., Baxter, Amy E., Xu, Lanwei, Gimotty, Phyllis A., Faryabi, Robert B., Wherry, E. John, Pear, Warren S., Jordan, Martha S.
Publicado 2023

CtIP-mediated resection is essential for viability and can operate independently of BRCA1

por Polato, Federica, Callen, Elsa, Wong, Nancy, Faryabi, Robert, Bunting, Samuel, Chen, Hua-Tang, Kozak, Marina, Kruhlak, Michael J., Reczek, Colleen R., Lee, Wen-Hwa, Ludwig, Thomas, Baer, Richard, Feigenbaum, Lionel, Jackson, Stephen, Nussenzweig, André
Publicado 2014

ALC1 links chromatin accessibility to PARP inhibitor response in homologous recombination-deficient cells

por Verma, Priyanka, Zhou, Yeqiao, Cao, Zhendong, Deraska, Peter V., Deb, Moniher, Arai, Eri, Li, Weihua, Shao, Yue, Puentes, Laura, Li, Yiwen, Patankar, Sonali, Mach, Robert H., Faryabi, Robert B., Shi, Junwei, Greenberg, Roger A.
Publicado 2021

Trib1 regulates T cell differentiation during chronic infection by restraining the effector program

por Rome, Kelly S., Stein, Sarah J., Kurachi, Makoto, Petrovic, Jelena, Schwartz, Gregory W., Mack, Ethan A., Uljon, Sacha, Wu, Winona W., DeHart, Anne G., McClory, Susan E., Xu, Lanwei, Gimotty, Phyllis A., Blacklow, Stephen C., Faryabi, Robert B., Wherry, E. John, Jordan, Martha S., Pear, Warren S.
Publicado 2020

Single-cell multi-omics analysis of human pancreatic islets reveals novel cellular states in Type 1 Diabetes

por Fasolino, Maria, Schwartz, Gregory W., Patil, Abhijeet R., Mongia, Aanchal, Golson, Maria L., Wang, Yue J., Morgan, Ashleigh, Liu, Chengyang, Schug, Jonathan, Liu, Jinping, Wu, Minghui, Traum, Daniel, Kondo, Ayano, May, Catherine L., Goldman, Naomi, Wang, Wenliang, Feldman, Michael, Moore, Jason H., Japp, Alberto S., Betts, Michael R., Faryabi, Robert B., Naji, Ali, Kaestner, Klaus H., Vahedi, Golnaz
Publicado 2022