Epigenomics Reveals a Functional Genome Anatomy and a New Approach to Common Disease

por Feinberg, Andrew P.
Publicado 2010

Potential energy landscapes identify the information-theoretic nature of the epigenome

por Jenkinson, Garrett, Pujadas, Elisabet, Goutsias, John, Feinberg, Andrew P.
Publicado 2017

An information-theoretic approach to the modeling and analysis of whole-genome bisulfite sequencing data

por Jenkinson, Garrett, Abante, Jordi, Feinberg, Andrew P., Goutsias, John
Publicado 2018

Estimating DNA methylation potential energy landscapes from nanopore sequencing data

por Abante, Jordi, Kambhampati, Sandeep, Feinberg, Andrew P., Goutsias, John
Publicado 2021

Analyzing whole genome bisulfite sequencing data from highly divergent genotypes

por Wulfridge, Phillip, Langmead, Ben, Feinberg, Andrew P, Hansen, Kasper D
Publicado 2019

Large organized chromatin K9-modifications (LOCKs) distinguish differentiated from embryonic stem cells

por Wen, Bo, Wu, Hao, Shinkai, Yoichi, Irizarry, Rafael A., Feinberg, Andrew P.
Publicado 2009

An LSC epigenetic signature is largely mutation independent and implicates the HOXA cluster in AML pathogenesis

por Jung, Namyoung, Dai, Bo, Gentles, Andrew J., Majeti, Ravindra, Feinberg, Andrew P.
Publicado 2015

Ranking genomic features using an information-theoretic measure of epigenetic discordance

por Jenkinson, Garrett, Abante, Jordi, Koldobskiy, Michael A., Feinberg, Andrew P., Goutsias, John
Publicado 2019

Genome-scale epigenetic reprogramming during epithelial to mesenchymal transition

por McDonald, Oliver G., Wu, Hao, Timp, Winston, Doi, Akiko, Feinberg, Andrew P.
Publicado 2011

DNA methylation is stable during replication and cell cycle arrest

por Vandiver, Amy R., Idrizi, Adrian, Rizzardi, Lindsay, Feinberg, Andrew P., Hansen, Kasper D.
Publicado 2015

Euchromatin islands in large heterochromatin domains are enriched for CTCF binding and differentially DNA-methylated regions

por Wen, Bo, Wu, Hao, Loh, Yuin-Han, Briem, Eirikur, Daley, George Q, Feinberg, Andrew P
Publicado 2012

“Gap hunting” to characterize clustered probe signals in Illumina methylation array data

por Andrews, Shan V., Ladd-Acosta, Christine, Feinberg, Andrew P., Hansen, Kasper D., Fallin, M. Daniele
Publicado 2016

DNA methylation entropy is associated with DNA sequence features and developmental epigenetic divergence

por Fang, Yuqi, Ji, Zhicheng, Zhou, Weiqiang, Abante, Jordi, Koldobskiy, Michael A, Ji, Hongkai, Feinberg, Andrew P
Publicado 2023

Evaluation of techniques for performing cellular isolation and preservation during microgravity conditions

por Rizzardi, Lindsay F, Kunz, Hawley, Rubins, Kathleen, Chouker, Alexander, Quiriarte, Heather, Sams, Clarence, Crucian, Brian E, Feinberg, Andrew P
Publicado 2016

Large-scale hypomethylated blocks associated with Epstein-Barr virus–induced B-cell immortalization

por Hansen, Kasper D., Sabunciyan, Sarven, Langmead, Ben, Nagy, Noemi, Curley, Rebecca, Klein, Georg, Klein, Eva, Salamon, Daniel, Feinberg, Andrew P.
Publicado 2014

Measuring cell-type specific differential methylation in human brain tissue

por Montaño, Carolina M, Irizarry, Rafael A, Kaufmann, Walter E, Talbot, Konrad, Gur, Raquel E, Feinberg, Andrew P, Taub, Margaret A
Publicado 2013

Reversible switching between epigenetic states in honeybee behavioral subcastes

por Herb, Brian R., Wolschin, Florian, Hansen, Kasper D., Aryee, Martin J., Langmead, Ben, Irizarry, Rafael, Amdam, Gro V., Feinberg, Andrew P.
Publicado 2012

Large hypomethylated blocks as a universal defining epigenetic alteration in human solid tumors

por Timp, Winston, Bravo, Hector Corrada, McDonald, Oliver G, Goggins, Michael, Umbricht, Chris, Zeiger, Martha, Feinberg, Andrew P, Irizarry, Rafael A
Publicado 2014

Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability

por Rizzardi, Lindsay F., Hickey, Peter F., DiBlasi, Varenka Rodriguez, Tryggvadóttir, Rakel, Callahan, Colin M., Idrizi, Adrian, Hansen, Kasper D., Feinberg, Andrew P.
Publicado 2019

Age and sun exposure-related widespread genomic blocks of hypomethylation in nonmalignant skin

por Vandiver, Amy R, Irizarry, Rafael A, Hansen, Kasper D, Garza, Luis A, Runarsson, Arni, Li, Xin, Chien, Anna L, Wang, Timothy S, Leung, Sherry G, Kang, Sewon, Feinberg, Andrew P
Publicado 2015