Nucleic acid visualization with UCSF Chimera

por Couch, Gregory S., Hendrix, Donna K., Ferrin, Thomas E.
Publicado 2006

enhancedGraphics: a Cytoscape app for enhanced node graphics

por Morris, John H., Kuchinsky, Allan, Ferrin, Thomas E., Pico, Alexander R.
Publicado 2014

Using Sequence Similarity Networks for Visualization of Relationships Across Diverse Protein Superfamilies

por Atkinson, Holly J., Morris, John H., Ferrin, Thomas E., Babbitt, Patricia C.
Publicado 2009

Clinical Persistence of Chlamydia trachomatis Sexually Transmitted Strains Involves Novel Mutations in the Functional αββα Tetramer of the Tryptophan Synthase Operon

por Somboonna, Naraporn, Ziklo, Noa, Ferrin, Thomas E., Hyuk Suh, Jung, Dean, Deborah
Publicado 2019

CyAnimator: Simple Animations of Cytoscape Networks

por Morris, John H., Vijay, Dhameliya, Federowicz, Steven, Pico, Alexander R., Ferrin, Thomas E.
Publicado 2015

Tools for integrated sequence-structure analysis with UCSF Chimera

por Meng, Elaine C, Pettersen, Eric F, Couch, Gregory S, Huang, Conrad C, Ferrin, Thomas E
Publicado 2006

Enhancing UCSF Chimera through web services

por Huang, Conrad C., Meng, Elaine C., Morris, John H., Pettersen, Eric F., Ferrin, Thomas E.
Publicado 2014

Comparison of methods for genomic localization of gene trap sequences

por Harper, Courtney A, Huang, Conrad C, Stryke, Doug, Kawamoto, Michiko, Ferrin, Thomas E, Babbitt, Patricia C
Publicado 2006

setsApp for Cytoscape: Set operations for Cytoscape Nodes and Edges

por Morris, John H., Lotia, Samad, Wu, Allan, Doncheva, Nadezhda T., Albrecht, Mario, Pico, Alexander R., Ferrin, Thomas E
Publicado 2015

DASP3: identification of protein sequences belonging to functionally relevant groups

por Leuthaeuser, Janelle B., Morris, John H., Harper, Angela F., Ferrin, Thomas E., Babbitt, Patricia C., Fetrow, Jacquelyn S.
Publicado 2016

Evidence of HIV exposure and transient seroreactivity in archived HIV-negative severe hemophiliac sera

por Tenenbaum, Scott A, Morris, Cindy A, Alexander, Steve S, McFerrin, Harris E, Garry, Robert F, Leissinger, Cindy A
Publicado 2005

Lytic HSV-1 infection induces the multifunctional transcription factor Early Growth Response-1 (EGR-1) in rabbit corneal cells

por Bedadala, Gautam R, Palem, Jayavardhana R, Graham, Lorna, Hill, James M, McFerrin, Harris E, Hsia, Shao-Chung
Publicado 2011

Rapidly Self-Renewing Human Multipotent Marrow Stromal Cells (hMSC) Express Sialyl Lewis X and Actively Adhere to Arterial Endothelium in a Chick Embryo Model System

por McFerrin, Harris E., Olson, Scott D., Gutschow, Miriam V., Semon, Julie A., Sullivan, Deborah E., Prockop, Darwin J.
Publicado 2014

UCSF ChimeraX: Tools for structure building and analysis

por Meng, Elaine C., Goddard, Thomas D., Pettersen, Eric F., Couch, Greg S., Pearson, Zach J., Morris, John H., Ferrin, Thomas E.
Publicado 2023

clusterMaker: a multi-algorithm clustering plugin for Cytoscape

por Morris, John H, Apeltsin, Leonard, Newman, Aaron M, Baumbach, Jan, Wittkop, Tobias, Su, Gang, Bader, Gary D, Ferrin, Thomas E
Publicado 2011

Kaposi’s sarcoma-associated herpesvirus G-protein coupled receptor activates the canonical Wnt/β-catenin signaling pathway

por Angelova, Magdalena, Ferris, MaryBeth, Swan, Kenneth F, McFerrin, Harris E, Pridjian, Gabriella, Morris, Cindy A, Sullivan, Deborah E
Publicado 2014

An Atlas of Peroxiredoxins Created Using an Active Site Profile-Based Approach to Functionally Relevant Clustering of Proteins

por Harper, Angela F., Leuthaeuser, Janelle B., Babbitt, Patricia C., Morris, John H., Ferrin, Thomas E., Poole, Leslie B., Fetrow, Jacquelyn S.
Publicado 2017

A Novel Peptide Derived from Human Apolipoprotein E Is an Inhibitor of Tumor Growth and Ocular Angiogenesis

por Bhattacharjee, Partha S., Huq, Tashfin S., Mandal, Tarun K., Graves, Richard A., Muniruzzaman, Syed, Clement, Christian, McFerrin, Harris E., Hill, James M.
Publicado 2011

Kaposi's sarcoma associated herpesvirus G-protein coupled receptor activation of cyclooxygenase-2 in vascular endothelial cells

por Shelby, Bryan D, LaMarca, Heather L, McFerrin, Harris E, Nelson, Anne B, Lasky, Joseph A, Sun, Gang, Myatt, Leslie, Offermann, Margaret K, Morris, Cindy A, Sullivan, Deborah E
Publicado 2007

High-Glucose-Induced Endothelial Cell Injury Is Inhibited by a Peptide Derived from Human Apolipoprotein E

por Bhattacharjee, Partha S., Huq, Tashfin S., Potter, Valencia, Young, Anna, Davenport, Ian R., Graves, Richard, Mandal, Tarun K., Clement, Christian, McFerrin, Harris E., Muniruzzaman, Syed, Ireland, Shubha K., Hill, James M.
Publicado 2012