Alignment-free analysis of barcode sequences by means of compression-based methods

por La Rosa, Massimo, Fiannaca, Antonino, Rizzo, Riccardo, Urso, Alfonso
Publicado 2013

Probabilistic topic modeling for the analysis and classification of genomic sequences

por La Rosa, Massimo, Fiannaca, Antonino, Rizzo, Riccardo, Urso, Alfonso
Publicado 2015

miRTissue: a web application for the analysis of miRNA-target interactions in human tissues

por Fiannaca, Antonino, La Rosa, Massimo, La Paglia, Laura, Urso, Alfonso
Publicado 2018

A Graph Neural Network Approach for the Analysis of siRNA-Target Biological Networks

por La Rosa, Massimo, Fiannaca, Antonino, La Paglia, Laura, Urso, Alfonso
Publicado 2022

A knowledge-based decision support system in bioinformatics: an application to protein complex extraction

por Fiannaca, Antonino, La Rosa, Massimo, Urso, Alfonso, Rizzo, Riccardo, Gaglio, Salvatore
Publicado 2013

GOWDL: gene ontology-driven wide and deep learning model for cell typing of scRNA-seq data

por Fiannaca, Antonino, La Rosa, Massimo, La Paglia, Laura, Gaglio, Salvatore, Urso, Alfonso
Publicado 2023

Analysis of miRNA expression profiles in breast cancer using biclustering

por Fiannaca, Antonino, La Rosa, Massimo, La Paglia, Laura, Rizzo, Riccardo, Urso, Alfonso
Publicado 2015

MiRNATIP: a SOM-based miRNA-target interactions predictor

por Fiannaca, Antonino, Rosa, Massimo La, Paglia, Laura La, Rizzo, Riccardo, Urso, Alfonso
Publicado 2016

nRC: non-coding RNA Classifier based on structural features

por Fiannaca, Antonino, La Rosa, Massimo, La Paglia, Laura, Rizzo, Riccardo, Urso, Alfonso
Publicado 2017

BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources

por Messina, Antonio, Fiannaca, Antonino, La Paglia, Laura, La Rosa, Massimo, Urso, Alfonso
Publicado 2018

miRTissue (ce): extending miRTissue web service with the analysis of ceRNA-ceRNA interactions

por Fiannaca, Antonino, Paglia, Laura La, Rosa, Massimo La, Rizzo, Riccardo, Urso, Alfonso
Publicado 2020

The BioDICE Taverna plugin for clustering and visualization of biological data: a workflow for molecular compounds exploration

por Fiannaca, Antonino, Rosa, Massimo La, Fatta, Giuseppe Di, Gaglio, Salvatore, Rizzo, Riccardo, Urso, Alfonso
Publicado 2014

MiRNA therapeutics based on logic circuits of biological pathways

por Boscaino, Valeria, Fiannaca, Antonino, La Paglia, Laura, La Rosa, Massimo, Rizzo, Riccardo, Urso, Alfonso
Publicado 2019

BITS2019: the sixteenth annual meeting of the Italian society of bioinformatics

por Urso, Alfonso, Fiannaca, Antonino, La Rosa, Massimo, La Paglia, Laura, Lo Bosco, Giosue’, Rizzo, Riccardo
Publicado 2020

ceRNA Network Regulation of TGF-β, WNT, FOXO, Hedgehog Pathways in the Pharynx of Ciona robusta

por Vizzini, Aiti, Bonura, Angela, La Paglia, Laura, Fiannaca, Antonino, La Rosa, Massimo, Urso, Alfonso, Arizza, Vincenzo
Publicado 2021

Transcriptomic and Bioinformatic Analyses Identifying a Central Mif-Cop9-Nf-kB Signaling Network in Innate Immunity Response of Ciona robusta

por La Paglia, Laura, Vazzana, Mirella, Mauro, Manuela, Dumas, Francesca, Fiannaca, Antonino, Urso, Alfonso, Arizza, Vincenzo, Vizzini, Aiti
Publicado 2023

Deep learning models for bacteria taxonomic classification of metagenomic data

por Fiannaca, Antonino, La Paglia, Laura, La Rosa, Massimo, Lo Bosco, Giosue’, Renda, Giovanni, Rizzo, Riccardo, Gaglio, Salvatore, Urso, Alfonso
Publicado 2018

Transcriptomic Analyses Reveal 2 and 4 Family Members of Cytochromes P450 (CYP) Involved in LPS Inflammatory Response in Pharynx of Ciona robusta

por Vizzini, Aiti, Bonura, Angela, La Paglia, Laura, Fiannaca, Antonino, La Rosa, Massimo, Urso, Alfonso, Mauro, Manuela, Vazzana, Mirella, Arizza, Vincenzo
Publicado 2021

Impact of the flame retardant 2,2’4,4’-tetrabromodiphenyl ether (PBDE-47) in THP-1 macrophage-like cell function via small extracellular vesicles

por Longo, Valeria, Aloi, Noemi, Lo Presti, Elena, Fiannaca, Antonino, Longo, Alessandra, Adamo, Giorgia, Urso, Alfonso, Meraviglia, Serena, Bongiovanni, Antonella, Cibella, Fabio, Colombo, Paolo
Publicado 2023

The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes

por Romano, Paolo, Céol, Arnaud, Dräger, Andreas, Fiannaca, Antonino, Giugno, Rosalba, La Rosa, Massimo, Milanesi, Luciano, Pfeffer, Ulrich, Rizzo, Riccardo, Shin, Soo-Yong, Xia, Junfeng, Urso, Alfonso
Publicado 2019