Diverse and variable virus communities in wild plant populations revealed by metagenomic tools

por Susi, Hanna, Filloux, Denis, Frilander, Mikko J., Roumagnac, Philippe, Laine, Anna-Liisa
Publicado 2019

Characterization of alfalfa virus F, a new member of the genus Marafivirus

por Nemchinov, Lev G., François, Sarah, Roumagnac, Phillipe, Ogliastro, Mylène, Hammond, Rosemarie W., Mollov, Dimitre S., Filloux, Denis
Publicado 2018

Large-scale survey reveals pervasiveness and potential function of endogenous geminiviral sequences in plants

por Sharma, Vikas, Lefeuvre, Pierre, Roumagnac, Philippe, Filloux, Denis, Teycheney, Pierre-Yves, Martin, Darren P, Maumus, Florian
Publicado 2020

metaXplor: an interactive viral and microbial metagenomic data manager

por Sempéré, Guilhem, Pétel, Adrien, Abbé, Magsen, Lefeuvre, Pierre, Roumagnac, Philippe, Mahé, Frédéric, Baurens, Gaël, Filloux, Denis
Publicado 2021

Illuminating an Ecological Blackbox: Using High Throughput Sequencing to Characterize the Plant Virome Across Scales

por Maclot, François, Candresse, Thierry, Filloux, Denis, Malmstrom, Carolyn M., Roumagnac, Philippe, van der Vlugt, René, Massart, Sébastien
Publicado 2020

Characterisation of the Viral Community Associated with the Alfalfa Weevil (Hypera postica) and Its Host Plant, Alfalfa (Medicago sativa)

por François, Sarah, Antoine-Lorquin, Aymeric, Kulikowski, Maximilien, Frayssinet, Marie, Filloux, Denis, Fernandez, Emmanuel, Roumagnac, Philippe, Froissart, Rémy, Ogliastro, Mylène
Publicado 2021

Exploring the diversity of Poaceae-infecting mastreviruses on Reunion Island using a viral metagenomics-based approach

por Claverie, Sohini, Ouattara, Alassane, Hoareau, Murielle, Filloux, Denis, Varsani, Arvind, Roumagnac, Philippe, Martin, Darren P., Lett, Jean-Michel, Lefeuvre, Pierre
Publicado 2019

Molecular Viral Diagnosis and Sanitation of Yam Genetic Resources: Implications for Safe Yam Germplasm Exchange

por Umber, Marie, Filloux, Denis, Gélabale, Suzia, Gomez, Rose-Marie, Marais, Armelle, Gallet, Séverine, Gamiette, Franciane, Pavis, Claudie, Teycheney, Pierre-Yves
Publicado 2020

Comparison of the Virome of Quarantined Sugarcane Varieties and the Virome of Grasses Growing near the Quarantine Station

por Daugrois, Jean H., Filloux, Denis, Julian, Charlotte, Claude, Lisa, Ferdinand, Romain, Fernandez, Emmanuel, Fontes, Hugo, Rott, Philippe C., Roumagnac, Philippe
Publicado 2021

Molecular diversity of yam virus Y and identification of banana mild mosaic virus isolates infecting yam (Dioscorea spp.)

por Diouf, Mame Boucar, Guyader, Sébastien, Nopoly, Marie-Michelle, Gaspard, Olyvia, Filloux, Denis, Candresse, Thierry, Marais, Armelle, Teycheney, Pierre-Yves, Umber, Marie
Publicado 2023

Metagenomics reveals the structure of Mastrevirus–host interaction network within an agro-ecosystem

por Claverie, Sohini, Hoareau, Murielle, Chéhida, Sélim Ben, Filloux, Denis, Varsani, Arvind, Roumagnac, Philippe, Martin, Darren P, Lett, Jean-Michel, Lefeuvre, Pierre
Publicado 2023

Long-Term Anthropogenic Management and Associated Loss of Plant Diversity Deeply Impact Virome Richness and Composition of Poaceae Communities

por Maclot, François, Debue, Virginie, Malmstrom, Carolyn M., Filloux, Denis, Roumagnac, Philippe, Eck, Mathilde, Tamisier, Lucie, Blouin, Arnaud G., Candresse, Thierry, Massart, Sébastien
Publicado 2023

Nanopore Sequencing Is a Credible Alternative to Recover Complete Genomes of Geminiviruses

por Ben Chehida, Selim, Filloux, Denis, Fernandez, Emmanuel, Moubset, Oumaima, Hoareau, Murielle, Julian, Charlotte, Blondin, Laurence, Lett, Jean-Michel, Roumagnac, Philippe, Lefeuvre, Pierre
Publicado 2021

Nanopore-based detection and characterization of yam viruses

por Filloux, Denis, Fernandez, Emmanuel, Loire, Etienne, Claude, Lisa, Galzi, Serge, Candresse, Thierry, Winter, Stephan, Jeeva, M. L., Makeshkumar, T., Martin, Darren P., Roumagnac, Philippe
Publicado 2018

Genetic Diversity of Rice stripe necrosis virus and New Insights into Evolution of the Genus Benyvirus

por Bagayoko, Issiaka, Celli, Marcos Giovanni, Romay, Gustavo, Poulicard, Nils, Pinel-Galzi, Agnès, Julian, Charlotte, Filloux, Denis, Roumagnac, Philippe, Sérémé, Drissa, Bragard, Claude, Hébrard, Eugénie
Publicado 2021

Appearances Can Be Deceptive: Revealing a Hidden Viral Infection with Deep Sequencing in a Plant Quarantine Context

por Candresse, Thierry, Filloux, Denis, Muhire, Brejnev, Julian, Charlotte, Galzi, Serge, Fort, Guillaume, Bernardo, Pauline, Daugrois, Jean-Heindrich, Fernandez, Emmanuel, Martin, Darren P., Varsani, Arvind, Roumagnac, Philippe
Publicado 2014

Metagenomic-Based Screening and Molecular Characterization of Cowpea-Infecting Viruses in Burkina Faso

por Palanga, Essowè, Filloux, Denis, Martin, Darren P., Fernandez, Emmanuel, Gargani, Daniel, Ferdinand, Romain, Zabré, Jean, Bouda, Zakaria, Neya, James Bouma, Sawadogo, Mahamadou, Traore, Oumar, Peterschmitt, Michel, Roumagnac, Philippe
Publicado 2016

A New Prevalent Densovirus Discovered in Acari. Insight from Metagenomics in Viral Communities Associated with Two-Spotted Mite (Tetranychus urticae) Populations

por François, Sarah, Mutuel, Doriane, Duncan, Alison B., Rodrigues, Leonor R., Danzelle, Celya, Lefevre, Sophie, Santos, Inês, Frayssinet, Marie, Fernandez, Emmanuel, Filloux, Denis, Roumagnac, Philippe, Froissart, Rémy, Ogliastro, Mylène
Publicado 2019

Novel Ampeloviruses Infecting Cassava in Central Africa and the South-West Indian Ocean Islands

por Kwibuka, Yves, Bisimwa, Espoir, Blouin, Arnaud G., Bragard, Claude, Candresse, Thierry, Faure, Chantal, Filloux, Denis, Lett, Jean-Michel, Maclot, François, Marais, Armelle, Ravelomanantsoa, Santatra, Shakir, Sara, Vanderschuren, Hervé, Massart, Sébastien
Publicado 2021

Occurrence of a novel mastrevirus in sugarcane germplasm collections in Florida, Guadeloupe and Réunion

por Boukari, Wardatou, Alcalá-Briseño, Ricardo I., Kraberger, Simona, Fernandez, Emmanuel, Filloux, Denis, Daugrois, Jean-Heinrich, Comstock, Jack C., Lett, Jean-Michel, Martin, Darren P., Varsani, Arvind, Roumagnac, Philippe, Polston, Jane E., Rott, Philippe C.
Publicado 2017