A Leafhopper-Transmissible DNA Virus with Novel Evolutionary Lineage in the Family Geminiviridae Implicated in Grapevine Redleaf Disease by Next-Generation Sequencing

por Poojari, Sudarsana, Alabi, Olufemi J., Fofanov, Viacheslav Y., Naidu, Rayapati A.
Publicado 2013

Correction: A Leafhopper-Transmissible DNA Virus with Novel Evolutionary Lineage in the Family Geminiviridae Implicated in Grapevine Redleaf Disease by Next-Generation Sequencing

por Poojari, Sudarsana, Alabi, Olufemi J., Fofanov, Viacheslav Y., Naidu, Rayapati A.
Publicado 2016

Variant site strain typer (VaST): efficient strain typing using a minimal number of variant genomic sites

por Furstenau, Tara N., Cocking, Jill H., Sahl, Jason W., Fofanov, Viacheslav Y.
Publicado 2018

Sample pooling methods for efficient pathogen screening: Practical implications

por Furstenau, Tara N., Cocking, Jill H., Hepp, Crystal M., Fofanov, Viacheslav Y.
Publicado 2020

Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction

por Bryant, Drew H, Moll, Mark, Chen, Brian Y, Fofanov, Viacheslav Y, Kavraki, Lydia E
Publicado 2010

MTSv: rapid alignment-based taxonomic classification and high-confidence metagenomic analysis

por Furstenau, Tara N., Schneider, Tsosie, Shaffer, Isaac, Vazquez, Adam J., Sahl, Jason, Fofanov, Viacheslav
Publicado 2022

A Survey of Health Disparities, Social Determinants of Health, and Converging Morbidities in a County Jail: A Cultural-Ecological Assessment of Health Conditions in Jail Population...

por Trotter, Robert T, Lininger, Monica R, Camplain, Ricky, Fofanov, Viacheslav Y, Camplain, Carolyn, Baldwin, Julie A
Publicado 2018

Rapid Response of Nitrogen Cycling Gene Transcription to Labile Carbon Amendments in a Soil Microbial Community

por Chuckran, Peter F., Fofanov, Viacheslav, Hungate, Bruce A., Morrissey, Ember M., Schwartz, Egbert, Walkup, Jeth, Dijkstra, Paul
Publicado 2021

A fecal sequel: Testing the limits of a genetic assay for bat species identification

por Walker, Faith M., Tobin, Abby, Simmons, Nancy B., Sobek, Colin J., Sanchez, Daniel E., Chambers, Carol L., Fofanov, Viacheslav Y.
Publicado 2019

Separase Loss of Function Cooperates with the Loss of p53 in the Initiation and Progression of T- and B-Cell Lymphoma, Leukemia and Aneuploidy in Mice

por Mukherjee, Malini, Ge, Gouqing, Zhang, Nenggang, Huang, Eryong, Nakamura, Lanelle V., Minor, Marissa, Fofanov, Viacheslav, Rao, Pullivarthi H., Herron, Alan, Pati, Debananda
Publicado 2011

Metagenomic Analysis of the Airborne Environment in Urban Spaces

por Be, Nicholas A., Thissen, James B., Fofanov, Viacheslav Y., Allen, Jonathan E., Rojas, Mark, Golovko, George, Fofanov, Yuriy, Koshinsky, Heather, Jaing, Crystal J.
Publicado 2014

Guano exposed: Impact of aerobic conditions on bat fecal microbiota

por Fofanov, Viacheslav Y., Furstenau, Tara N., Sanchez, Daniel, Hepp, Crystal M., Cocking, Jill, Sobek, Colin, Pagel, Nicole, Walker, Faith, Chambers, Carol L.
Publicado 2018

Prediction of enzyme function based on 3D templates of evolutionarily important amino acids

por Kristensen, David M, Ward, R Matthew, Lisewski, Andreas Martin, Erdin, Serkan, Chen, Brian Y, Fofanov, Viacheslav Y, Kimmel, Marek, Kavraki, Lydia E, Lichtarge, Olivier
Publicado 2008

Detection of Bacillus anthracis DNA in Complex Soil and Air Samples Using Next-Generation Sequencing

por Be, Nicholas A., Thissen, James B., Gardner, Shea N., McLoughlin, Kevin S., Fofanov, Viacheslav Y., Koshinsky, Heather, Ellingson, Sally R., Brettin, Thomas S., Jackson, Paul J., Jaing, Crystal J.
Publicado 2013

Identification of Genome-Wide Mutations in Ciprofloxacin-Resistant F. tularensis LVS Using Whole Genome Tiling Arrays and Next Generation Sequencing

por Jaing, Crystal J., McLoughlin, Kevin S., Thissen, James B., Zemla, Adam, Gardner, Shea N., Vergez, Lisa M., Bourguet, Feliza, Mabery, Shalini, Fofanov, Viacheslav Y., Koshinsky, Heather, Jackson, Paul J.
Publicado 2016

Health Disparities and Converging Epidemics in Jail Populations: Protocol for a Mixed-Methods Study

por Trotter II, Robert T, Camplain, Ricky, Eaves, Emery R, Fofanov, Viacheslav Y, Dmitrieva, Natalia O, Hepp, Crystal M, Warren, Meghan, Barrios, Brianna A, Pagel, Nicole, Mayer, Alyssa, Baldwin, Julie A
Publicado 2018

Multi-faceted metagenomic analysis of spacecraft associated surfaces reveal planetary protection relevant microbial composition

por Highlander, Sarah K., Wood, Jason M., Gillece, John D., Folkerts, Megan, Fofanov, Viacheslav, Furstenau, Tara, Singh, Nitin K., Guan, Lisa, Seuylemezian, Arman, Benardini, James N., Engelthaler, David M., Venkateswaran, Kasthuri, Keim, Paul S.
Publicado 2023

A Bacillus anthracis Genome Sequence from the Sverdlovsk 1979 Autopsy Specimens

por Sahl, Jason W., Pearson, Talima, Okinaka, Richard, Schupp, James M., Gillece, John D., Heaton, Hannah, Birdsell, Dawn, Hepp, Crystal, Fofanov, Viacheslav, Noseda, Ramón, Fasanella, Antonio, Hoffmaster, Alex, Wagner, David M., Keim, Paul
Publicado 2016

Phylogenetic analysis of West Nile Virus in Maricopa County, Arizona: Evidence for dynamic behavior of strains in two major lineages in the American Southwest

por Hepp, Crystal M., Cocking, Jill Hager, Valentine, Michael, Young, Steven J., Damian, Dan, Samuels-Crow, Kimberly E., Sheridan, Krystal, Fofanov, Viacheslav Y., Furstenau, Tara N., Busch, Joseph D., Erickson, Daryn E., Lancione, Ryan C., Smith, Kirk, Will, James, Townsend, John, Keim, Paul S., Engelthaler, David M.
Publicado 2018

A Quantitative Assessment of Staphylococcus aureus Community Carriage in Yuma, Arizona

por Russakoff, Benjamin, Wood, Colin, Lininger, Monica R, Barger, Steven D, Trotter, Robert T, Maltinsky, Sara, Mbegbu, Mimi, Coyne, Briana, Panisello Yagüe, David, Kyman, Shari, Tucker-Morgan, Kara, Ceniceros, Kathya, Padilla, Cristina, Hurtado, Kevin, Menard, Ashley, Villa, Francisco, Wayment, Heidi A, Hepp, Crystal, Furstenau, Tara, Fofanov, Viacheslav, Liu, Cindy M, Pearson, Talima R
Publicado 2022