Unbiased Taxonomic Annotation of Metagenomic Samples

por Fosso, Bruno, Pesole, Graziano, Rosselló, Francesc, Valiente, Gabriel
Publicado 2018

Stem Cell Impairment at the Host-Microbiota Interface in Colorectal Cancer

por Marzano, Marinella, Fosso, Bruno, Piancone, Elisabetta, Defazio, Giuseppe, Pesole, Graziano, De Robertis, Mariangela
Publicado 2021

The Microbial Community Associated with Rhizostoma pulmo: Ecological Significance and Potential Consequences for Marine Organisms and Human Health

por Stabili, Loredana, Rizzo, Lucia, Basso, Lorena, Marzano, Marinella, Fosso, Bruno, Pesole, Graziano, Piraino, Stefano
Publicado 2020

Accurate quantification of bacterial abundance in metagenomic DNAs accounting for variable DNA integrity levels

por Manzari, Caterina, Oranger, Annarita, Fosso, Bruno, Piancone, Elisabetta, Pesole, Graziano, D’Erchia, Anna Maria
Publicado 2020

Amplicon-Based Microbiome Profiling: From Second- to Third-Generation Sequencing for Higher Taxonomic Resolution

por Notario, Elisabetta, Visci, Grazia, Fosso, Bruno, Gissi, Carmela, Tanaskovic, Nina, Rescigno, Maria, Marzano, Marinella, Pesole, Graziano
Publicado 2023

Functional Integration of mRNA Translational Control Programs

por MacNicol, Melanie C., Cragle, Chad E., Arumugam, Karthik, Fosso, Bruno, Pesole, Graziano, MacNicol, Angus M.
Publicado 2015

Enrichment of intestinal Lactobacillus by enhanced secretory IgA coating alters glucose homeostasis in P2rx7(−/−) mice

por Perruzza, Lisa, Strati, Francesco, Gargari, Giorgio, D’Erchia, Anna Maria, Fosso, Bruno, Pesole, Graziano, Guglielmetti, Simone, Grassi, Fabio
Publicado 2019

Machine Learning Data Analysis Highlights the Role of Parasutterella and Alloprevotella in Autism Spectrum Disorders

por Pietrucci, Daniele, Teofani, Adelaide, Milanesi, Marco, Fosso, Bruno, Putignani, Lorenza, Messina, Francesco, Pesole, Graziano, Desideri, Alessandro, Chillemi, Giovanni
Publicado 2022

BioMaS: a modular pipeline for Bioinformatic analysis of Metagenomic AmpliconS

por Fosso, Bruno, Santamaria, Monica, Marzano, Marinella, Alonso-Alemany, Daniel, Valiente, Gabriel, Donvito, Giacinto, Monaco, Alfonso, Notarangelo, Pasquale, Pesole, Graziano
Publicado 2015

ITSoneDB: a comprehensive collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences

por Santamaria, Monica, Fosso, Bruno, Licciulli, Flavio, Balech, Bachir, Larini, Ilaria, Grillo, Giorgio, De Caro, Giorgio, Liuni, Sabino, Pesole, Graziano
Publicado 2018

Dynamic inosinome profiles reveal novel patient stratification and gender-specific differences in glioblastoma

por Silvestris, Domenico Alessandro, Picardi, Ernesto, Cesarini, Valeriana, Fosso, Bruno, Mangraviti, Nicolò, Massimi, Luca, Martini, Maurizio, Pesole, Graziano, Locatelli, Franco, Gallo, Angela
Publicado 2019

Human Endometrial Microbiota at Term of Normal Pregnancies

por Leoni, Claudia, Ceci, Oronzo, Manzari, Caterina, Fosso, Bruno, Volpicella, Mariateresa, Ferrari, Alessandra, Fiorella, Paola, Pesole, Graziano, Cicinelli, Ettore, Ceci, Luigi Ruggiero
Publicado 2019

ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy

por Tangaro, Marco A, Defazio, Giuseppe, Fosso, Bruno, Licciulli, Vito Flavio, Grillo, Giorgio, Donvito, Giacinto, Lavezzo, Enrico, Baruzzo, Giacomo, Pesole, Graziano, Santamaria, Monica
Publicado 2021

Lactobacillus rossiae, a Vitamin B(12) Producer, Represents a Metabolically Versatile Species within the Genus Lactobacillus

por De Angelis, Maria, Bottacini, Francesca, Fosso, Bruno, Kelleher, Philip, Calasso, Maria, Di Cagno, Raffaella, Ventura, Marco, Picardi, Ernesto, van Sinderen, Douwe, Gobbetti, Marco
Publicado 2014

A Differential Metabarcoding Approach to Describe Taxonomy Profiles of Bacteria and Archaea in the Saltern of Margherita di Savoia (Italy)

por Leoni, Claudia, Volpicella, Mariateresa, Fosso, Bruno, Manzari, Caterina, Piancone, Elisabetta, Dileo, Maria C. G., Arcadi, Erika, Yakimov, Michail, Pesole, Graziano, Ceci, Luigi R.
Publicado 2020

A primer on machine learning techniques for genomic applications

por Monaco, Alfonso, Pantaleo, Ester, Amoroso, Nicola, Lacalamita, Antonio, Lo Giudice, Claudio, Fonzino, Adriano, Fosso, Bruno, Picardi, Ernesto, Tangaro, Sabina, Pesole, Graziano, Bellotti, Roberto
Publicado 2021

Microbiome composition indicate dysbiosis and lower richness in tumor breast tissues compared to healthy adjacent paired tissue, within the same women

por Esposito, Maria Valeria, Fosso, Bruno, Nunziato, Marcella, Casaburi, Giorgio, D’Argenio, Valeria, Calabrese, Alessandra, D’Aiuto, Massimiliano, Botti, Gerardo, Pesole, Graziano, Salvatore, Francesco
Publicado 2022

Comparative Fecal Microbiota Analysis of Infants With Acute Bronchiolitis Caused or Not Caused by Respiratory Syncytial Virus

por De Maio, Flavio, Buonsenso, Danilo, Bianco, Delia Mercedes, Giaimo, Martina, Fosso, Bruno, Monzo, Francesca Romana, Sali, Michela, Posteraro, Brunella, Valentini, Piero, Sanguinetti, Maurizio
Publicado 2022

Whole transcriptome profiling of Late-Onset Alzheimer’s Disease patients provides insights into the molecular changes involved in the disease

por Annese, Anita, Manzari, Caterina, Lionetti, Claudia, Picardi, Ernesto, Horner, David S., Chiara, Matteo, Caratozzolo, Mariano Francesco, Tullo, Apollonia, Fosso, Bruno, Pesole, Graziano, D’Erchia, Anna Maria
Publicado 2018

Accurate detection and quantification of SARS-CoV-2 genomic and subgenomic mRNAs by ddPCR and meta-transcriptomics analysis

por Oranger, Annarita, Manzari, Caterina, Chiara, Matteo, Notario, Elisabetta, Fosso, Bruno, Parisi, Antonio, Bianco, Angelica, Iacobellis, Michela, d’Avenia, Morena, D’Erchia, Anna Maria, Pesole, Graziano
Publicado 2021