Standardization Initiatives in the (eco)toxicogenomics Domain: A Review

por Sansone, Susanna Assunta, Morrison, Norman, Rocca-Serra, Philippe, Fostel, Jennifer
Publicado 2004

CEBS: a comprehensive annotated database of toxicological data

por Lea, Isabel A., Gong, Hui, Paleja, Anand, Rashid, Asif, Fostel, Jennifer
Publicado 2017

Protective Role of Interleukin-10 in Ozone-Induced Pulmonary Inflammation

por Backus, Gillian S., Howden, Reuben, Fostel, Jennifer, Bauer, Alison K., Cho, Hye-Youn, Marzec, Jacqui, Peden, David B., Kleeberger, Steven R.
Publicado 2010

Transcriptomic analysis of pathways regulated by toll-like receptor 4 in a murine model of chronic pulmonary inflammation and carcinogenesis

por Bauer, Alison K, Fostel, Jennifer, Degraff, Laura M, Rondini, Elizabeth A, Walker, Christopher, Grissom, Sherry F, Foley, Julie, Kleeberger, Steven R
Publicado 2009

Targeted Deletion of Nrf2 Reduces Urethane-Induced Lung Tumor Development in Mice

por Bauer, Alison K., Cho, Hye-Youn, Miller-DeGraff, Laura, Walker, Christopher, Helms, Katherine, Fostel, Jennifer, Yamamoto, Masayuki, Kleeberger, Steven R.
Publicado 2011

Maximizing biomarker discovery by minimizing gene signatures

por Chang, Chang, Wang, Junwei, Zhao, Chen, Fostel, Jennifer, Tong, Weida, Bushel, Pierre R, Deng, Youping, Pusztai, Lajos, Symmans, W Fraser, Shi, Tieliu
Publicado 2011

Current and Future Applications of Toxicogenomics: Results Summary of a Survey from the HESI Genomics State of Science Subcommittee

por Pettit, Syril, des Etages, Shelley Ann, Mylecraine, Louis, Snyder, Ronald, Fostel, Jennifer, Dunn, Robert T., Haymes, Kenneth, Duval, Manuel, Stevens, James, Afshari, Cynthia, Vickers, Alison
Publicado 2010

Gel-free multiplexed reduced representation bisulfite sequencing for large-scale DNA methylation profiling

por Boyle, Patrick, Clement, Kendell, Gu, Hongcang, Smith, Zachary D, Ziller, Michael, Fostel, Jennifer L, Holmes, Laurie, Meldrim, Jim, Kelley, Fontina, Gnirke, Andreas, Meissner, Alexander
Publicado 2012

Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues

por Webster, A. Francina, Zumbo, Paul, Fostel, Jennifer, Gandara, Jorge, Hester, Susan D., Recio, Leslie, Williams, Andrew, Wood, Charles E., Yauk, Carole L., Mason, Christopher E.
Publicado 2015

Standard reporting requirements for biological samples in metabolomics experiments: microbial and in vitro biology experiments

por van der Werf, Mariët J., Takors, Ralf, Smedsgaard, Jørn, Nielsen, Jens, Ferenci, Tom, Portais, Jean Charles, Wittmann, Christoph, Hooks, Mark, Tomassini, Alberta, Oldiges, Marco, Fostel, Jennifer, Sauer, Uwe
Publicado 2007

Compound Cytotoxicity Profiling Using Quantitative High-Throughput Screening

por Xia, Menghang, Huang, Ruili, Witt, Kristine L., Southall, Noel, Fostel, Jennifer, Cho, Ming-Hsuang, Jadhav, Ajit, Smith, Cynthia S., Inglese, James, Portier, Christopher J., Tice, Raymond R., Austin, Christopher P.
Publicado 2008

Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation

por Costello, Maura, Pugh, Trevor J., Fennell, Timothy J., Stewart, Chip, Lichtenstein, Lee, Meldrim, James C., Fostel, Jennifer L., Friedrich, Dennis C., Perrin, Danielle, Dionne, Danielle, Kim, Sharon, Gabriel, Stacey B., Lander, Eric S., Fisher, Sheila, Getz, Gad
Publicado 2013

Modeling biomedical experimental processes with OBI

por Brinkman, Ryan R, Courtot, Mélanie, Derom, Dirk, Fostel, Jennifer M, He, Yongqun, Lord, Phillip, Malone, James, Parkinson, Helen, Peters, Bjoern, Rocca-Serra, Philippe, Ruttenberg, Alan, Sansone, Susanna-Assunta, Soldatova, Larisa N, Stoeckert, Christian J, Turner, Jessica A, Zheng, Jie
Publicado 2010

Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories

por Boedigheimer, Michael J, Wolfinger, Russell D, Bass, Michael B, Bushel, Pierre R, Chou, Jeff W, Cooper, Matthew, Corton, J Christopher, Fostel, Jennifer, Hester, Susan, Lee, Janice S, Liu, Fenglong, Liu, Jie, Qian, Hui-Rong, Quackenbush, John, Pettit, Syril, Thompson, Karol L
Publicado 2008

Gene expression response in target organ and whole blood varies as a function of target organ injury phenotype

por Lobenhofer, Edward K, Auman, J Todd, Blackshear, Pamela E, Boorman, Gary A, Bushel, Pierre R, Cunningham, Michael L, Fostel, Jennifer M, Gerrish, Kevin, Heinloth, Alexandra N, Irwin, Richard D, Malarkey, David E, Merrick, B Alex, Sieber, Stella O, Tucker, Charles J, Ward, Sandra M, Wilson, Ralph E, Hurban, Patrick, Tennant, Raymond W, Paules, Richard S
Publicado 2008

Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway

por Huang, Ruili, Sakamuru, Srilatha, Martin, Matt T., Reif, David M., Judson, Richard S., Houck, Keith A., Casey, Warren, Hsieh, Jui-Hua, Shockley, Keith R., Ceger, Patricia, Fostel, Jennifer, Witt, Kristine L., Tong, Weida, Rotroff, Daniel M., Zhao, Tongan, Shinn, Paul, Simeonov, Anton, Dix, David J., Austin, Christopher P., Kavlock, Robert J., Tice, Raymond R., Xia, Menghang
Publicado 2014

CEBS—Chemical Effects in Biological Systems: a public data repository integrating study design and toxicity data with microarray and proteomics data

por Waters, Michael, Stasiewicz, Stanley, Alex Merrick, B., Tomer, Kenneth, Bushel, Pierre, Paules, Richard, Stegman, Nancy, Nehls, Gerald, Yost, Kenneth J., Johnson, C. Harris, Gustafson, Scott F., Xirasagar, Sandhya, Xiao, Nianqing, Huang, Cheng-Cheng, Boyer, Paul, Chan, Denny D., Pan, Qinyan, Gong, Hui, Taylor, John, Choi, Danielle, Rashid, Asif, Ahmed, Ayazaddin, Howle, Reese, Selkirk, James, Tennant, Raymond, Fostel, Jennifer
Publicado 2008

NIEHS/FDA CLARITY-BPA research program update

por Heindel, Jerrold J., Newbold, Retha R., Bucher, John R., Camacho, Luísa, Delclos, K. Barry, Lewis, Sherry M., Vanlandingham, Michelle, Churchwell, Mona I., Twaddle, Nathan C., McLellen, Michelle, Chidambaram, Mani, Bryant, Matthew, Woodling, Kellie, Gamboa da Costa, Gonçalo, Ferguson, Sherry A., Flaws, Jodi, Howard, Paul C., Walker, Nigel J., Zoeller, R. Thomas, Fostel, Jennifer, Favaro, Carolyn, Schug, Thaddeus T.
Publicado 2015

Meeting Report from the Second “Minimum Information for Biological and Biomedical Investigations” (MIBBI) workshop

por Kettner, Carsten, Field, Dawn, Sansone, Susanna-Assunta, Taylor, Chris, Aerts, Jan, Binns, Nigel, Blake, Andrew, Britten, Cedrik M., de Marco, Ario, Fostel, Jennifer, Gaudet, Pascale, González-Beltrán, Alejandra, Hardy, Nigel, Hellemans, Jan, Hermjakob, Henning, Juty, Nick, Leebens-Mack, Jim, Maguire, Eamonn, Neumann, Steffen, Orchard, Sandra, Parkinson, Helen, Piel, William, Ranganathan, Shoba, Rocca-Serra, Philippe, Santarsiero, Annapaola, Shotton, David, Sterk, Peter, Untergasser, Andreas, Whetzel, Patricia L.
Publicado 2010

Whole-exome sequencing and clinical interpretation of FFPE tumor samples to guide precision cancer medicine

por Allen, Eliezer M. Van, Wagle, Nikhil, Stojanov, Petar, Perrin, Danielle L., Cibulskis, Kristian, Marlow, Sara, Jane-Valbuena, Judit, Friedrich, Dennis C., Kryukov, Gregory, Carter, Scott L., McKenna, Aaron, Sivachenko, Andrey, Rosenberg, Mara, Kiezun, Adam, Voet, Douglas, Lawrence, Michael, Lichtenstein, Lee T., Gentry, Jeff G., Huang, Franklin W., Fostel, Jennifer, Farlow, Deborah, Barbie, David, Gandhi, Leena, Lander, Eric S., Gray, Stacy W., Joffe, Steven, Janne, Pasi, Garber, Judy, MacConaill, Laura, Lindeman, Neal, Rollins, Barrett, Kantoff, Philip, Fisher, Sheila A., Gabriel, Stacey, Getz, Gad, Garraway, Levi A.
Publicado 2014