An analysis of the graph processing landscape

por Coimbra, Miguel E., Francisco, Alexandre P., Veiga, Luís
Publicado 2021

Global optimal eBURST analysis of multilocus typing data using a graphic matroid approach

por Francisco, Alexandre P, Bugalho, Miguel, Ramirez, Mário, Carriço, João A
Publicado 2009

Regulatory Snapshots: Integrative Mining of Regulatory Modules from Expression Time Series and Regulatory Networks

por Gonçalves, Joana P., Aires, Ricardo S., Francisco, Alexandre P., Madeira, Sara C.
Publicado 2012

Interactogeneous: Disease Gene Prioritization Using Heterogeneous Networks and Full Topology Scores

por Gonçalves, Joana P., Francisco, Alexandre P., Moreau, Yves, Madeira, Sara C.
Publicado 2012

Pattern matching through Chaos Game Representation: bridging numerical and discrete data structures for biological sequence analysis

por Vinga, Susana, Carvalho, Alexandra M, Francisco, Alexandre P, Russo, Luís MS, Almeida, Jonas S
Publicado 2012

Not Seeing the Forest for the Trees: Size of the Minimum Spanning Trees (MSTs) Forest and Branch Significance in MST-Based Phylogenetic Analysis

por Teixeira, Andreia Sofia, Monteiro, Pedro T., Carriço, João A, Ramirez, Mário, Francisco, Alexandre P.
Publicado 2015

PHYLOViZ Online: web-based tool for visualization, phylogenetic inference, analysis and sharing of minimum spanning trees

por Ribeiro-Gonçalves, Bruno, Francisco, Alexandre P., Vaz, Cátia, Ramirez, Mário, Carriço, João André
Publicado 2016

PHYLOViZ: phylogenetic inference and data visualization for sequence based typing methods

por Francisco, Alexandre P, Vaz, Ctia, Monteiro, Pedro T, Melo-Cristino, José, Ramirez, Mário, Carrio, Joo A
Publicado 2012

Fast phylogenetic inference from typing data

por Carriço, João A., Crochemore, Maxime, Francisco, Alexandre P., Pissis, Solon P., Ribeiro-Gonçalves, Bruno, Vaz, Cátia
Publicado 2018

GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens

por Zhou, Zhemin, Alikhan, Nabil-Fareed, Sergeant, Martin J., Luhmann, Nina, Vaz, Cátia, Francisco, Alexandre P., Carriço, João André, Achtman, Mark
Publicado 2018

TypOn: the microbial typing ontology

por Vaz, Cátia, Francisco, Alexandre P, Silva, Mickael, Jolley, Keith A, Bray, James E, Pouseele, Hannes, Rothganger, Joerg, Ramirez, Mário, Carriço, João A
Publicado 2014

YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae

por Monteiro, Pedro T., Mendes, Nuno D., Teixeira, Miguel C., d’Orey, Sofia, Tenreiro, Sandra, Mira, Nuno P., Pais, Hélio, Francisco, Alexandre P., Carvalho, Alexandra M., Lourenço, Artur B., Sá-Correia, Isabel, Oliveira, Arlindo L., Freitas, Ana T.
Publicado 2008