iREAD: a tool for intron retention detection from RNA-seq data

por Li, Hong-Dong, Funk, Cory C., Price, Nathan D.
Publicado 2020

Transcriptional Analysis of Aggressiveness and Heterogeneity across Grades of Astrocytomas

por Wang, Chunjing, Funk, Cory C., Eddy, James A., Price, Nathan D.
Publicado 2013

AUREA: an open-source software system for accurate and user-friendly identification of relative expression molecular signatures

por Earls, John C, Eddy, James A, Funk, Cory C, Ko, Younhee, Magis, Andrew T, Price, Nathan D
Publicado 2013

The viral hypothesis: how herpesviruses may contribute to Alzheimer’s disease

por Wainberg, Michael, Luquez, Tain, Koelle, David M., Readhead, Ben, Johnston, Christine, Darvas, Martin, Funk, Cory C.
Publicado 2021

Dense data enables 21st century clinical trials

por Roach, Jared C., Hodes, John F., Funk, Cory C., Shankle, William R, Merrill, David A., Hood, Leroy, Bramen, Jennifer
Publicado 2022

Multi-study Integration of Brain Cancer Transcriptomes Reveals Organ-Level Molecular Signatures

por Sung, Jaeyun, Kim, Pan-Jun, Ma, Shuyi, Funk, Cory C., Magis, Andrew T., Wang, Yuliang, Hood, Leroy, Geman, Donald, Price, Nathan D.
Publicado 2013

Ion channel expression patterns in glioblastoma stem cells with functional and therapeutic implications for malignancy

por Pollak, Julia, Rai, Karan G., Funk, Cory C., Arora, Sonali, Lee, Eunjee, Zhu, Jun, Price, Nathan D., Paddison, Patrick J., Ramirez, Jan-Marino, Rostomily, Robert C.
Publicado 2017

Risk factors for severe COVID-19 differ by age for hospitalized adults

por Molani, Sevda, Hernandez, Patricia V., Roper, Ryan T., Duvvuri, Venkata R., Baumgartner, Andrew M., Goldman, Jason D., Ertekin-Taner, Nilüfer, Funk, Cory C., Price, Nathan D., Rappaport, Noa, Hadlock, Jennifer J.
Publicado 2022

Targeting TWIST1 through loss of function inhibits tumorigenicity of human glioblastoma

por Mikheev, Andrei M., Mikheeva, Svetlana A., Severs, Liza J., Funk, Cory C., Huang, Lei, McFaline‐Figueroa, José L., Schwensen, Jeanette, Trapnell, Cole, Price, Nathan D., Wong, Stephen, Rostomily, Robert C.
Publicado 2018

Microglia show differential transcriptomic response to Aβ peptide aggregates ex vivo and in vivo

por McFarland, Karen N, Ceballos, Carolina, Rosario, Awilda, Ladd, Thomas, Moore, Brenda, Golde, Griffin, Wang, Xue, Allen, Mariet, Ertekin-Taner, Nilüfer, Funk, Cory C, Robinson, Max, Baloni, Priyanka, Rappaport, Noa, Chakrabarty, Paramita, Golde, Todd E
Publicado 2021

Metabolic Network Analysis Reveals Altered Bile Acid Synthesis and Metabolism in Alzheimer’s Disease

por Baloni, Priyanka, Funk, Cory C., Yan, Jingwen, Yurkovich, James T., Kueider-Paisley, Alexandra, Nho, Kwangsik, Heinken, Almut, Jia, Wei, Mahmoudiandehkordi, Siamak, Louie, Gregory, Saykin, Andrew J., Arnold, Matthias, Kastenmüller, Gabi, Griffiths, William J., Thiele, Ines, Kaddurah-Daouk, Rima, Price, Nathan D.
Publicado 2020

A systems‐biology clinical trial of a personalized multimodal lifestyle intervention for early Alzheimer's disease

por McEwen, Sarah C., Merrill, David A., Bramen, Jennifer, Porter, Verna, Panos, Stella, Kaiser, Scott, Hodes, John, Ganapathi, Aarthi, Bell, Lesley, Bookheimer, Tess, Glatt, Ryan, Rapozo, Molly, Ross, Mary Kay, Price, Nathan D., Kelly, Daniel, Funk, Cory C., Hood, Leroy, Roach, Jared C.
Publicado 2021

Manifestations of Alzheimer’s disease genetic risk in the blood are evident in a multiomic analysis in healthy adults aged 18 to 90

por Heath, Laura, Earls, John C., Magis, Andrew T., Kornilov, Sergey A., Lovejoy, Jennifer C., Funk, Cory C., Rappaport, Noa, Logsdon, Benjamin A., Mangravite, Lara M., Kunkle, Brian W., Martin, Eden R., Naj, Adam C., Ertekin-Taner, Nilüfer, Golde, Todd E., Hood, Leroy, Price, Nathan D.
Publicado 2022

Integrative functional genomic analysis of intron retention in human and mouse brain with Alzheimer's disease

por Li, Hong‐Dong, Funk, Cory C., McFarland, Karen, Dammer, Eric B., Allen, Mariet, Carrasquillo, Minerva M., Levites, Yona, Chakrabarty, Paramita, Burgess, Jeremy D., Wang, Xue, Dickson, Dennis, Seyfried, Nicholas T., Duong, Duc M., Lah, James J., Younkin, Steven G., Levey, Allan I., Omenn, Gilbert S., Ertekin‐Taner, Nilüfer, Golde, Todd E., Price, Nathan D.
Publicado 2021

Multi-Omic analyses characterize the ceramide/sphingomyelin pathway as a therapeutic target in Alzheimer’s disease

por Baloni, Priyanka, Arnold, Matthias, Buitrago, Luna, Nho, Kwangsik, Moreno, Herman, Huynh, Kevin, Brauner, Barbara, Louie, Gregory, Kueider-Paisley, Alexandra, Suhre, Karsten, Saykin, Andrew J., Ekroos, Kim, Meikle, Peter J., Hood, Leroy, Price, Nathan D., Doraiswamy, P. Murali, Funk, Cory C., Hernández, A. Iván, Kastenmüller, Gabi, Baillie, Rebecca, Han, Xianlin, Kaddurah-Daouk, Rima
Publicado 2022

Motivational, proteostatic and transcriptional deficits precede synapse loss, gliosis and neurodegeneration in the B6.Htt(Q111/+) model of Huntington’s disease

por Bragg, Robert M., Coffey, Sydney R., Weston, Rory M., Ament, Seth A., Cantle, Jeffrey P., Minnig, Shawn, Funk, Cory C., Shuttleworth, Dominic D., Woods, Emily L., Sullivan, Bonnie R., Jones, Lindsey, Glickenhaus, Anne, Anderson, John S., Anderson, Michael D., Dunnett, Stephen B., Wheeler, Vanessa C., MacDonald, Marcy E., Brooks, Simon P., Price, Nathan D., Carroll, Jeffrey B.
Publicado 2017

Corrigendum: Motivational, proteostatic and transcriptional deficits precede synapse loss, gliosis and neurodegeneration in the B6.Htt(Q111/+) model of Huntington’s disease

por Bragg, Robert M., Coffey, Sydney R., Weston, Rory M., Ament, Seth A., Cantle, Jeffrey P., Minnig, Shawn, Funk, Cory C., Shuttleworth, Dominic D., Woods, Emily L., Sullivan, Bonnie R., Jones, Lindsey, Glickenhaus, Anne, Anderson, John S., Anderson, Michael D., Dunnett, Stephen B., Wheeler, Vanessa C., MacDonald, Marcy E., Brooks, Simon P., Price, Nathan D., Carroll, Jeffrey B.
Publicado 2017

TLR5 decoy receptor as a novel anti-amyloid therapeutic for Alzheimer’s disease

por Chakrabarty, Paramita, Li, Andrew, Ladd, Thomas B., Strickland, Michael R., Koller, Emily J., Burgess, Jeremy D., Funk, Cory C., Cruz, Pedro E., Allen, Mariet, Yaroshenko, Mariya, Wang, Xue, Younkin, Curtis, Reddy, Joseph, Lohrer, Benjamin, Mehrke, Leonie, Moore, Brenda D., Liu, Xuefei, Ceballos-Diaz, Carolina, Rosario, Awilda M., Medway, Christopher, Janus, Christopher, Li, Hong-Dong, Dickson, Dennis W., Giasson, Benoit I., Price, Nathan D., Younkin, Steven G., Ertekin-Taner, Nilüfer, Golde, Todd E.
Publicado 2018

Partial inhibition of mitochondrial complex I ameliorates Alzheimer’s disease pathology and cognition in APP/PS1 female mice

por Stojakovic, Andrea, Trushin, Sergey, Sheu, Anthony, Khalili, Layla, Chang, Su-Youne, Li, Xing, Christensen, Trace, Salisbury, Jeffrey L., Geroux, Rachel E., Gateno, Benjamin, Flannery, Padraig J., Dehankar, Mrunal, Funk, Cory C., Wilkins, Jordan, Stepanova, Anna, O’Hagan, Tara, Galkin, Alexander, Nesbitt, Jarred, Zhu, Xiujuan, Tripathi, Utkarsh, Macura, Slobodan, Tchkonia, Tamar, Pirtskhalava, Tamar, Kirkland, James L., Kudgus, Rachel A., Schoon, Renee A., Reid, Joel M., Yamazaki, Yu, Kanekiyo, Takahisa, Zhang, Song, Nemutlu, Emirhan, Dzeja, Petras, Jaspersen, Adam, Kwon, Ye In Christopher, Lee, Michael K., Trushina, Eugenia
Publicado 2021

Meta-Analysis of the Alzheimer’s Disease Human Brain Transcriptome and Functional Dissection in Mouse Models

por Wan, Ying-Wooi, Al-Ouran, Rami, Mangleburg, Carl G., Perumal, Thanneer M., Lee, Tom V., Allison, Katherine, Swarup, Vivek, Funk, Cory C., Gaiteri, Chris, Allen, Mariet, Wang, Minghui, Neuner, Sarah M., Kaczorowski, Catherine C., Philip, Vivek M., Howell, Gareth R., Martini-Stoica, Heidi, Zheng, Hui, Mei, Hongkang, Zhong, Xiaoyan, Kim, Jungwoo Wren, Dawson, Valina L., Dawson, Ted M., Pao, Ping-Chieh, Tsai, Li-Huei, Haure-Mirande, Jean-Vianney, Ehrlich, Michelle E., Chakrabarty, Paramita, Levites, Yona, Wang, Xue, Dammer, Eric B., Srivastava, Gyan, Mukherjee, Sumit, Sieberts, Solveig K., Omberg, Larsson, Dang, Kristen D., Eddy, James A., Snyder, Phil, Chae, Yooree, Amberkar, Sandeep, Wei, Wenbin, Hide, Winston, Preuss, Christoph, Ergun, Ayla, Ebert, Phillip J., Airey, David C., Mostafavi, Sara, Yu, Lei, Klein, Hans-Ulrich, Carter, Gregory W., Collier, David A., Golde, Todd E., Levey, Allan I., Bennett, David A., Estrada, Karol, Townsend, T. Matthew, Zhang, Bin, Schadt, Eric, De Jager, Philip L., Price, Nathan D., Ertekin-Taner, Nilüfer, Liu, Zhandong, Shulman, Joshua M., Mangravite, Lara M., Logsdon, Benjamin A.
Publicado 2020