Genomic characterization of Salmonella Cerro ST367, an emerging Salmonella subtype in cattle in the United States

por Rodriguez-Rivera, Lorraine D, Moreno Switt, Andrea I, Degoricija, Lovorka, Fang, Rixun, Cummings, Craig A, Furtado, Manohar R, Wiedmann, Martin, den Bakker, Henk C
Publicado 2014

Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss

por den Bakker, Henk C, Cummings, Craig A, Ferreira, Vania, Vatta, Paolo, Orsi, Renato H, Degoricija, Lovorka, Barker, Melissa, Petrauskene, Olga, Furtado, Manohar R, Wiedmann, Martin
Publicado 2010

SARS-CoV-2 variants of concern surveillance including Omicron using RT-PCR–based genotyping offers comparable performance to whole genome sequencing

por Vanoni, Simone, Matulevicius, Arnoldas, Avdiu, Besard, Scantamburlo, Giada, Ulekleiv, Camilla, Brzoska, Pius M., Furtado, Manohar R., Feenstra, Jelena D. M., Rico, Alain, Gandhi, Manoj, Giacobazzi, Elisabetta, Masi, Elisa, Paulmichl, Markus, Nofziger, Charity
Publicado 2022

Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica

por den Bakker, Henk C, Moreno Switt, Andrea I, Govoni, Gregory, Cummings, Craig A, Ranieri, Matthew L, Degoricija, Lovorka, Hoelzer, Karin, Rodriguez-Rivera, Lorraine D, Brown, Stephanie, Bolchacova, Elena, Furtado, Manohar R, Wiedmann, Martin
Publicado 2011

Comprehensive mutation analysis of 17 Y-chromosomal short tandem repeat polymorphisms included in the AmpFlSTR® Yfiler® PCR amplification kit

por Goedbloed, Miriam, Vermeulen, Mark, Fang, Rixun N., Lembring, Maria, Wollstein, Andreas, Ballantyne, Kaye, Lao, Oscar, Brauer, Silke, Krüger, Carmen, Roewer, Lutz, Lessig, Rüdiger, Ploski, Rafal, Dobosz, Tadeusz, Henke, Lotte, Henke, Jürgen, Furtado, Manohar R., Kayser, Manfred
Publicado 2009

Identification and Characterization of Novel Salmonella Mobile Elements Involved in the Dissemination of Genes Linked to Virulence and Transmission

por Moreno Switt, Andrea I., den Bakker, Henk C., Cummings, Craig A., Rodriguez-Rivera, Lorraine D., Govoni, Gregory, Raneiri, Matthew L., Degoricija, Lovorka, Brown, Stephanie, Hoelzer, Karin, Peters, Joseph E., Bolchacova, Elena, Furtado, Manohar R., Wiedmann, Martin
Publicado 2012

Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing

por Cummings, Craig A, Bormann Chung, Christina A, Fang, Rixun, Barker, Melissa, Brzoska, Pius, Williamson, Phillip C, Beaudry, Jodi, Matthews, Molly, Schupp, James, Wagner, David M, Birdsell, Dawn, Vogler, Amy J, Furtado, Manohar R, Keim, Paul, Budowle, Bruce
Publicado 2010

Comparative Analysis of Genome Sequences Covering the Seven Cronobacter Species

por Joseph, Susan, Desai, Prerak, Ji, Yongmei, Cummings, Craig A., Shih, Rita, Degoricija, Lovorka, Rico, Alain, Brzoska, Pius, Hamby, Stephen E., Masood, Naqash, Hariri, Sumyya, Sonbol, Hana, Chuzhanova, Nadia, McClelland, Michael, Furtado, Manohar R., Forsythe, Stephen J.
Publicado 2012

Dominance of multidrug resistant CC271 clones in macrolide-resistant streptococcus pneumoniae in Arizona

por Bowers, Jolene R, Driebe, Elizabeth M, Nibecker, Jennifer L, Wojack, Bette R, Sarovich, Derek S, Wong, Ada H, Brzoska, Pius M, Hubert, Nathaniel, Knadler, Andrew, Watson, Lindsey M, Wagner, David M, Furtado, Manohar R, Saubolle, Michael, Engelthaler, David M, Keim, Paul S
Publicado 2012

Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus

por Driebe, Elizabeth M., Sahl, Jason W., Roe, Chandler, Bowers, Jolene R., Schupp, James M., Gillece, John D., Kelley, Erin, Price, Lance B., Pearson, Talima R., Hepp, Crystal M., Brzoska, Pius M., Cummings, Craig A., Furtado, Manohar R., Andersen, Paal S., Stegger, Marc, Engelthaler, David M., Keim, Paul S.
Publicado 2015