Spatial organization of the budding yeast genome in the cell nucleus and identification of specific chromatin interactions from multi-chromosome constrained chromatin model

por Gürsoy, Gamze, Xu, Yun, Liang, Jie
Publicado 2017

Biocompatibility of nanosilver-coated orthodontic brackets: an in vivo study

por Metin-Gürsoy, Gamze, Taner, Lale, Barış, Emre
Publicado 2016

Using Ethereum blockchain to store and query pharmacogenomics data via smart contracts

por Gürsoy, Gamze, Brannon, Charlotte M., Gerstein, Mark
Publicado 2020

Recovering genotypes and phenotypes using allele-specific genes

por Gürsoy, Gamze, Lu, Nancy, Wagner, Sarah, Gerstein, Mark
Publicado 2021

Spatial confinement is a major determinant of the folding landscape of human chromosomes

por Gürsoy, Gamze, Xu, Yun, Kenter, Amy L., Liang, Jie
Publicado 2014

Computational construction of 3D chromatin ensembles and prediction of functional interactions of alpha-globin locus from 5C data

por Gürsoy, Gamze, Xu, Yun, Kenter, Amy L., Liang, Jie
Publicado 2017

Using blockchain to log genome dataset access: efficient storage and query

por Gürsoy, Gamze, Bjornson, Robert, Green, Molly E., Gerstein, Mark
Publicado 2020

LDmat: efficiently queryable compression of linkage disequilibrium matrices

por Weiner, Rockwell J, Lakhani, Chirag, Knowles, David A, Gürsoy, Gamze
Publicado 2023

When Biology Gets Personal: Hidden Challenges of Privacy and Ethics in Biological Big Data

por Gürsoy, Gamze, Harmanci, Arif, Tang, Haixu, Ayday, Erman, Brenner, Steven E.
Publicado 2019

FANCY: fast estimation of privacy risk in functional genomics data

por Gürsoy, Gamze, Brannon, Charlotte M, Navarro, Fabio C P, Gerstein, Mark
Publicado 2020

Fast and Scalable Private Genotype Imputation Using Machine Learning and Partially Homomorphic Encryption

por SARKAR, ESHA, CHIELLE, EDUARDO, GÜRSOY, GAMZE, MAZONKA, OLEG, GERSTEIN, MARK, MANIATAKOS, MICHAIL
Publicado 2021

Privacy-preserving cancer type prediction with homomorphic encryption

por Sarkar, Esha, Chielle, Eduardo, Gursoy, Gamze, Chen, Leo, Gerstein, Mark, Maniatakos, Michail
Publicado 2023

Storing and analyzing a genome on a blockchain

por Gürsoy, Gamze, Brannon, Charlotte M., Ni, Eric, Wagner, Sarah, Khanna, Amol, Gerstein, Mark
Publicado 2022

Navigating ethical quandaries with the privacy dilemma of biomedical datasets

por Gürsoy, Gamze, Doerr, Megan, Wilbanks, John, Wagner, Jennifer K., Tang, Haixu, Brenner, Steven E.
Publicado 2020

DiNeR: a Differential graphical model for analysis of co-regulation Network Rewiring

por Zhang, Jing, Liu, Jason, Lee, Donghoon, Lou, Shaoke, Chen, Zhanlin, Gürsoy, Gamze, Gerstein, Mark
Publicado 2020

Unique Toll-Like Receptor 4 Activation by NAMPT/PBEF Induces NFκB Signaling and Inflammatory Lung Injury

por Camp, Sara M., Ceco, Ermelinda, Evenoski, Carrie L., Danilov, Sergei M., Zhou, Tong, Chiang, Eddie T., Moreno-Vinasco, Liliana, Mapes, Brandon, Zhao, Jieling, Gursoy, Gamze, Brown, Mary E., Adyshev, Djanybek M., Siddiqui, Shahid S., Quijada, Hector, Sammani, Saad, Letsiou, Eleftheria, Saadat, Laleh, Yousef, Mohammed, Wang, Ting, Liang, Jie, Garcia, Joe G. N.
Publicado 2015

Recurrent repeat expansions in human cancer genomes

por Erwin, Graham S., Gürsoy, Gamze, Al-Abri, Rashid, Suriyaprakash, Ashwini, Dolzhenko, Egor, Zhu, Kevin, Hoerner, Christian R., White, Shannon M., Ramirez, Lucia, Vadlakonda, Ananya, Vadlakonda, Alekhya, von Kraut, Konor, Park, Julia, Brannon, Charlotte M., Sumano, Daniel A., Kirtikar, Raushun A., Erwin, Alicia A., Metzner, Thomas J., Yuen, Ryan K. C., Fan, Alice C., Leppert, John T., Eberle, Michael A., Gerstein, Mark, Snyder, Michael P.
Publicado 2022

An integrative ENCODE resource for cancer genomics

por Zhang, Jing, Lee, Donghoon, Dhiman, Vineet, Jiang, Peng, Xu, Jie, McGillivray, Patrick, Yang, Hongbo, Liu, Jason, Meyerson, William, Clarke, Declan, Gu, Mengting, Li, Shantao, Lou, Shaoke, Xu, Jinrui, Lochovsky, Lucas, Ung, Matthew, Ma, Lijia, Yu, Shan, Cao, Qin, Harmanci, Arif, Yan, Koon-Kiu, Sethi, Anurag, Gürsoy, Gamze, Schoenberg, Michael Rutenberg, Rozowsky, Joel, Warrell, Jonathan, Emani, Prashant, Yang, Yucheng T., Galeev, Timur, Kong, Xiangmeng, Liu, Shuang, Li, Xiaotong, Krishnan, Jayanth, Feng, Yanlin, Rivera-Mulia, Juan Carlos, Adrian, Jessica, Broach, James R, Bolt, Michael, Moran, Jennifer, Fitzgerald, Dominic, Dileep, Vishnu, Liu, Tingting, Mei, Shenglin, Sasaki, Takayo, Trevilla-Garcia, Claudia, Wang, Su, Wang, Yanli, Zang, Chongzhi, Wang, Daifeng, Klein, Robert J., Snyder, Michael, Gilbert, David M., Yip, Kevin, Cheng, Chao, Yue, Feng, Liu, X. Shirley, White, Kevin P., Gerstein, Mark
Publicado 2020