GenAPI: a tool for gene absence-presence identification in fragmented bacterial genome sequences

por Gabrielaite, Migle, Marvig, Rasmus L.
Publicado 2020

Induction of Broad β-lactam Resistance in Achromobacter ruhlandii by Exposure to Ticarcillin Is Primarily Linked to Substitutions in Murein Peptide Ligase Mpl

por Andersen, Camilla, Gabrielaite, Migle, Nørskov-Lauritsen, Niels
Publicado 2022

Achromobacter spp. genetic adaptation in cystic fibrosis

por Gabrielaite, Migle, Nielsen, Finn C., Johansen, Helle K., Marvig, Rasmus L.
Publicado 2021

Gene Loss and Acquisition in Lineages of Pseudomonas aeruginosa Evolving in Cystic Fibrosis Patient Airways

por Gabrielaite, Migle, Johansen, Helle K., Molin, Søren, Nielsen, Finn C., Marvig, Rasmus L.
Publicado 2020

Genomic and Phenotypic Evolution of Achromobacter xylosoxidans during Chronic Airway Infections of Patients with Cystic Fibrosis

por Khademi, S. M. Hossein, Gabrielaite, Migle, Paulsson, Magnus, Knulst, Mattis, Touriki, Eleni, Marvig, Rasmus L., Påhlman, Lisa I.
Publicado 2021

Transmission and Antibiotic Resistance of Achromobacter in Cystic Fibrosis

por Gabrielaite, Migle, Bartell, Jennifer A., Nørskov-Lauritsen, Niels, Pressler, Tacjana, Nielsen, Finn C., Johansen, Helle K., Marvig, Rasmus L.
Publicado 2021

Deep-sequencing of viral genomes from a large and diverse cohort of treatment-naive HIV-infected persons shows associations between intrahost genetic diversity and viral load

por Gabrielaite, Migle, Bennedbæk, Marc, Rasmussen, Malthe Sebro, Kan, Virginia, Furrer, Hansjakob, Flisiak, Robert, Losso, Marcelo, Lundgren, Jens D., Marvig, Rasmus L.
Publicado 2023

The Copenhagen founder variant GP1BA c.58T>G is the most frequent cause of inherited thrombocytopenia in Denmark

por Leinøe, Eva, Brøns, Nanna, Rasmussen, Andreas Ørslev, Gabrielaite, Migle, Zaninetti, Carlo, Palankar, Raghavendra, Zetterberg, Eva, Rosthøj, Steen, Ostrowski, Sisse Rye, Rossing, Maria
Publicado 2021

Associations of functional human leucocyte antigen class I groups with HIV viral load in a heterogeneous cohort

por Zucco, Adrian G., Bennedbæk, Marc, Ekenberg, Christina, Gabrielaite, Migle, Leung, Preston, Polizzotto, Mark N., Kan, Virginia, Murray, Daniel D., Lundgren, Jens D., MacPherson, Cameron R.
Publicado 2023

Application of cell-free DNA for genomic tumor profiling: a feasibility study

por Ahlborn, Lise B., Rohrberg, Kristoffer S., Gabrielaite, Migle, Tuxen, Ida V., Yde, Christina W., Spanggaard, Iben, Santoni-Rugiu, Eric, Nielsen, Finn C., Lassen, Ulrik, Mau-Sorensen, Morten, Østrup, Olga
Publicado 2019

High frequency of pathogenic germline variants within homologous recombination repair in patients with advanced cancer

por Bertelsen, Birgitte, Tuxen, Ida Viller, Yde, Christina Westmose, Gabrielaite, Migle, Torp, Mathias Husted, Kinalis, Savvas, Oestrup, Olga, Rohrberg, Kristoffer, Spangaard, Iben, Santoni-Rugiu, Eric, Wadt, Karin, Mau-Sorensen, Morten, Lassen, Ulrik, Nielsen, Finn Cilius
Publicado 2019

Added Value of Reanalysis of Whole Exome- and Whole Genome Sequencing Data From Patients Suspected of Primary Immune Deficiency Using an Extended Gene Panel and Structural Variatio...

por Mørup, Sara Bohnstedt, Nazaryan-Petersen, Lusine, Gabrielaite, Migle, Reekie, Joanne, Marquart, Hanne V., Hartling, Hans Jakob, Marvig, Rasmus L., Katzenstein, Terese L., Masmas, Tania N., Lundgren, Jens, Murray, Daniel D., Helleberg, Marie, Borgwardt, Line
Publicado 2022

Circulating cell free DNA during definitive chemo-radiotherapy in non-small cell lung cancer patients – initial observations

por Nygård, Lotte, Ahlborn, Lise B., Persson, Gitte F., Chandrananda, Dineika, Langer, Jonathan W., Fischer, Barbara M., Langer, Seppo W., Gabrielaite, Miglė, Kjær, Andreas, Rosenfeld, Nitzan, Mouliere, Florent, Østrup, Olga, Vogelius, Ivan R., Bentzen, Søren M.
Publicado 2020

A Comparison of Tools for Copy-Number Variation Detection in Germline Whole Exome and Whole Genome Sequencing Data

por Gabrielaite, Migle, Torp, Mathias Husted, Rasmussen, Malthe Sebro, Andreu-Sánchez, Sergio, Vieira, Filipe Garrett, Pedersen, Christina Bligaard, Kinalis, Savvas, Madsen, Majbritt Busk, Kodama, Miyako, Demircan, Gül Sude, Simonyan, Arman, Yde, Christina Westmose, Olsen, Lars Rønn, Marvig, Rasmus L., Østrup, Olga, Rossing, Maria, Nielsen, Finn Cilius, Winther, Ole, Bagger, Frederik Otzen
Publicado 2021

Emergence and spread of SARS-CoV-2 lineage B.1.620 with variant of concern-like mutations and deletions

por Dudas, Gytis, Hong, Samuel L., Potter, Barney I., Calvignac-Spencer, Sébastien, Niatou-Singa, Frédéric S., Tombolomako, Thais B., Fuh-Neba, Terence, Vickos, Ulrich, Ulrich, Markus, Leendertz, Fabian H., Khan, Kamran, Huber, Carmen, Watts, Alexander, Olendraitė, Ingrida, Snijder, Joost, Wijnant, Kim N., Bonvin, Alexandre M.J.J., Martres, Pascale, Behillil, Sylvie, Ayouba, Ahidjo, Maidadi, Martin Foudi, Djomsi, Dowbiss Meta, Godwe, Celestin, Butel, Christelle, Šimaitis, Aistis, Gabrielaitė, Miglė, Katėnaitė, Monika, Norvilas, Rimvydas, Raugaitė, Ligita, Koyaweda, Giscard Wilfried, Kandou, Jephté Kaleb, Jonikas, Rimvydas, Nasvytienė, Inga, Žemeckienė, Živilė, Gečys, Dovydas, Tamušauskaitė, Kamilė, Norkienė, Milda, Vasiliūnaitė, Emilija, Žiogienė, Danguolė, Timinskas, Albertas, Šukys, Marius, Šarauskas, Mantas, Alzbutas, Gediminas, Aziza, Adrienne Amuri, Lusamaki, Eddy Kinganda, Cigolo, Jean-Claude Makangara, Mawete, Francisca Muyembe, Lofiko, Emmanuel Lokilo, Kingebeni, Placide Mbala, Tamfum, Jean-Jacques Muyembe, Belizaire, Marie Roseline Darnycka, Essomba, René Ghislain, Assoumou, Marie Claire Okomo, Mboringong, Akenji Blaise, Dieng, Alle Baba, Juozapaitė, Dovilė, Hosch, Salome, Obama, Justino, Ayekaba, Mitoha Ondo’o, Naumovas, Daniel, Pautienius, Arnoldas, Rafaï, Clotaire Donatien, Vitkauskienė, Astra, Ugenskienė, Rasa, Gedvilaitė, Alma, Čereškevičius, Darius, Lesauskaitė, Vaiva, Žemaitis, Lukas, Griškevičius, Laimonas, Baele, Guy
Publicado 2021