Bioinformatic Analysis of Temporal and Spatial Proteome Alternations During Infections

por Rahmatbakhsh, Matineh, Gagarinova, Alla, Babu, Mohan
Publicado 2021

HPiP: an R/Bioconductor package for predicting host–pathogen protein–protein interactions from protein sequences using ensemble machine learning approach

por Rahmatbakhsh, Matineh, Moutaoufik, Mohamed Taha, Gagarinova, Alla, Babu, Mohan
Publicado 2022

Recombination analysis of Soybean mosaic virus sequences reveals evidence of RNA recombination between distinct pathotypes

por Gagarinova, Alla G, Babu, Mohan, Strömvik, Martina V, Wang, Aiming
Publicado 2008

Auxotrophic and prototrophic conditional genetic networks reveal the rewiring of transcription factors in Escherichia coli

por Gagarinova, Alla, Hosseinnia, Ali, Rahmatbakhsh, Matineh, Istace, Zoe, Phanse, Sadhna, Moutaoufik, Mohamed Taha, Zilocchi, Mara, Zhang, Qingzhou, Aoki, Hiroyuki, Jessulat, Matthew, Kim, Sunyoung, Aly, Khaled A., Babu, Mohan
Publicado 2022

Ribosome-Dependent ATPase Interacts with Conserved Membrane Protein in Escherichia coli to Modulate Protein Synthesis and Oxidative Phosphorylation

por Babu, Mohan, Aoki, Hiroyuki, Chowdhury, Wasimul Q., Gagarinova, Alla, Graham, Chris, Phanse, Sadhna, Laliberte, Ben, Sunba, Noor, Jessulat, Matthew, Golshani, Ashkan, Emili, Andrew, Greenblatt, Jack F., Ganoza, M. Clelia
Publicado 2011

Novel Interactome of Saccharomyces cerevisiae Myosin Type II Identified by a Modified Integrated Membrane Yeast Two-Hybrid (iMYTH) Screen

por Santiago, Ednalise, Akamine, Pearl, Snider, Jamie, Wong, Victoria, Jessulat, Matthew, Deineko, Viktor, Gagarinova, Alla, Aoki, Hiroyuki, Minic, Zoran, Phanse, Sadhna, San Antonio, Andrea, Cubano, Luis A., Rymond, Brian C., Babu, Mohan, Stagljar, Igor, Rodriguez-Medina, Jose R.
Publicado 2016

ZapG (YhcB/DUF1043), a novel cell division protein in gamma-proteobacteria linking the Z-ring to septal peptidoglycan synthesis

por Mehla, Jitender, Liechti, George, Morgenstein, Randy M., Caufield, J. Harry, Hosseinnia, Ali, Gagarinova, Alla, Phanse, Sadhna, Goodacre, Norman, Brockett, Mary, Sakhawalkar, Neha, Babu, Mohan, Xiao, Rong, Montelione, Gaetano T., Vorobiev, Sergey, den Blaauwen, Tanneke, Hunt, John F., Uetz, Peter
Publicado 2021

Chemical-genetic profiling reveals limited cross-resistance between antimicrobial peptides with different modes of action

por Kintses, Bálint, Jangir, Pramod K., Fekete, Gergely, Számel, Mónika, Méhi, Orsolya, Spohn, Réka, Daruka, Lejla, Martins, Ana, Hosseinnia, Ali, Gagarinova, Alla, Kim, Sunyoung, Phanse, Sadhna, Csörgő, Bálint, Györkei, Ádám, Ari, Eszter, Lázár, Viktória, Nagy, István, Babu, Mohan, Pál, Csaba, Papp, Balázs
Publicado 2019

Genetic Interaction Maps in Escherichia coli Reveal Functional Crosstalk among Cell Envelope Biogenesis Pathways

por Babu, Mohan, Díaz-Mejía, J. Javier, Vlasblom, James, Gagarinova, Alla, Phanse, Sadhna, Graham, Chris, Yousif, Fouad, Ding, Huiming, Xiong, Xuejian, Nazarians-Armavil, Anaies, Alamgir, Md, Ali, Mehrab, Pogoutse, Oxana, Pe'er, Asaf, Arnold, Roland, Michaut, Magali, Parkinson, John, Golshani, Ashkan, Whitfield, Chris, Wodak, Shoshana J., Moreno-Hagelsieb, Gabriel, Greenblatt, Jack F., Emili, Andrew
Publicado 2011

Quantitative Genome-Wide Genetic Interaction Screens Reveal Global Epistatic Relationships of Protein Complexes in Escherichia coli

por Babu, Mohan, Arnold, Roland, Bundalovic-Torma, Cedoljub, Gagarinova, Alla, Wong, Keith S., Kumar, Ashwani, Stewart, Geordie, Samanfar, Bahram, Aoki, Hiroyuki, Wagih, Omar, Vlasblom, James, Phanse, Sadhna, Lad, Krunal, Yeou Hsiung Yu, Angela, Graham, Christopher, Jin, Ke, Brown, Eric, Golshani, Ashkan, Kim, Philip, Moreno-Hagelsieb, Gabriel, Greenblatt, Jack, Houry, Walid A., Parkinson, John, Emili, Andrew
Publicado 2014

Rewiring of the Human Mitochondrial Interactome during Neuronal Reprogramming Reveals Regulators of the Respirasome and Neurogenesis

por Moutaoufik, Mohamed Taha, Malty, Ramy, Amin, Shahreen, Zhang, Qingzhou, Phanse, Sadhna, Gagarinova, Alla, Zilocchi, Mara, Hoell, Larissa, Minic, Zoran, Gagarinova, Maria, Aoki, Hiroyuki, Stockwell, Jocelyn, Jessulat, Matthew, Goebels, Florian, Broderick, Kirsten, Scott, Nichollas E., Vlasblom, James, Musso, Gabriel, Prasad, Bhanu, Lamantea, Eleonora, Garavaglia, Barbara, Rajput, Alex, Murayama, Kei, Okazaki, Yasushi, Foster, Leonard J., Bader, Gary D., Cayabyab, Francisco S., Babu, Mohan
Publicado 2019