Correcting gene expression data when neither the unwanted variation nor the factor of interest are observed

por Jacob, Laurent, Gagnon-Bartsch, Johann A., Speed, Terence P.
Publicado 2016

Removing unwanted variation in a differential methylation analysis of Illumina HumanMethylation450 array data

por Maksimovic, Jovana, Gagnon-Bartsch, Johann A., Speed, Terence P., Oshlack, Alicia
Publicado 2015

A new normalization for Nanostring nCounter gene expression data

por Molania, Ramyar, Gagnon-Bartsch, Johann A, Dobrovic, Alexander, Speed, Terence P
Publicado 2019

Comprehensive evaluation of deconvolution methods for human brain gene expression

por Sutton, Gavin J., Poppe, Daniel, Simmons, Rebecca K., Walsh, Kieran, Nawaz, Urwah, Lister, Ryan, Gagnon-Bartsch, Johann A., Voineagu, Irina
Publicado 2022

Derivation and external validation of a simple risk score to predict in-hospital mortality in patients hospitalized for COVID-19: A multicenter retrospective cohort study

por Mann, Charlotte Z., Abshire, Chelsea, Yost, Monica, Kaatz, Scott, Swaminathan, Lakshmi, Flanders, Scott A., Prescott, Hallie C., Gagnon-Bartsch, Johann A.
Publicado 2021

Removing unwanted variation from large-scale RNA sequencing data with PRPS

por Molania, Ramyar, Foroutan, Momeneh, Gagnon-Bartsch, Johann A., Gandolfo, Luke C., Jain, Aryan, Sinha, Abhishek, Olshansky, Gavriel, Dobrovic, Alexander, Papenfuss, Anthony T., Speed, Terence P.
Publicado 2022

Signatures of tumour immunity distinguish Asian and non-Asian gastric adenocarcinomas

por Lin, Suling J, Gagnon-Bartsch, Johann A, Tan, Iain Beehuat, Earle, Sophie, Ruff, Louise, Pettinger, Katherine, Ylstra, Bauke, van Grieken, Nicole, Rha, Sun Young, Chung, Hyun Cheol, Lee, Ju-Seog, Cheong, Jae Ho, Noh, Sung Hoon, Aoyama, Toru, Miyagi, Yohei, Tsuburaya, Akira, Yoshikawa, Takaki, Ajani, Jaffer A, Boussioutas, Alex, Yeoh, Khay Guan, Yong, Wei Peng, So, Jimmy, Lee, Jeeyun, Kang, Won Ki, Kim, Sung, Kameda, Yoichi, Arai, Tomio, zur Hausen, Axel, Speed, Terence P, Grabsch, Heike I, Tan, Patrick
Publicado 2015