scReClassify: post hoc cell type classification of single-cell rNA-seq data

por Kim, Taiyun, Lo, Kitty, Geddes, Thomas A., Kim, Hani Jieun, Yang, Jean Yee Hwa, Yang, Pengyi
Publicado 2019

Autoencoder-based cluster ensembles for single-cell RNA-seq data analysis

por Geddes, Thomas A., Kim, Taiyun, Nan, Lihao, Burchfield, James G., Yang, Jean Y. H., Tao, Dacheng, Yang, Pengyi
Publicado 2019

SnapKin: a snapshot deep learning ensemble for kinase-substrate prediction from phosphoproteomics data

por Xiao, Di, Lin, Michael, Liu, Chunlei, Geddes, Thomas A, Burchfield, James G, Parker, Benjamin L, Humphrey, Sean J, Yang, Pengyi
Publicado 2023

Signaling Heterogeneity is Defined by Pathway Architecture and Intercellular Variability in Protein Expression

por Norris, Dougall, Yang, Pengyi, Shin, Sung-Young, Kearney, Alison L., Kim, Hani Jieun, Geddes, Thomas, Senior, Alistair M., Fazakerley, Daniel J., Nguyen, Lan K., James, David E., Burchfield, James G.
Publicado 2021

Genome-wide analysis in Drosophila reveals diet-by-gene interactions and uncovers diet-responsive genes

por Francis, Deanne, Ghazanfar, Shila, Havula, Essi, Krycer, James R, Strbenac, Dario, Senior, Alistair, Minard, Annabel Y, Geddes, Thomas, Nelson, Marin E, Weiss, Fiona, Stöckli, Jacqueline, Yang, Jean Y H, James, David E
Publicado 2021

Akt phosphorylates insulin receptor substrate to limit PI3K-mediated PIP3 synthesis

por Kearney, Alison L, Norris, Dougall M, Ghomlaghi, Milad, Kin Lok Wong, Martin, Humphrey, Sean J, Carroll, Luke, Yang, Guang, Cooke, Kristen C, Yang, Pengyi, Geddes, Thomas A, Shin, Sungyoung, Fazakerley, Daniel J, Nguyen, Lan K, James, David E, Burchfield, James G
Publicado 2021