Microbiota and cancer immunotherapy: in search of microbial signals

por Gharaibeh, Raad Z, Jobin, Christian
Publicado 2019

Background correction using dinucleotide affinities improves the performance of GCRMA

por Gharaibeh, Raad Z, Fodor, Anthony A, Gibas, Cynthia J
Publicado 2008

Accurate Estimates of Microarray Target Concentration from a Simple Sequence-Independent Langmuir Model

por Gharaibeh, Raad Z., Fodor, Anthony A., Gibas, Cynthia J.
Publicado 2010

The illusion of specific capture: surface and solution studies of suboptimal oligonucleotide hybridization

por Garhyan, Jaishree, Gharaibeh, Raad Z, McGee, Stephen, Gibas, Cynthia J
Publicado 2013

Application of Equilibrium Models of Solution Hybridization to Microarray Design and Analysis

por Gharaibeh, Raad Z., Newton, Joshua M., Weller, Jennifer W., Gibas, Cynthia J.
Publicado 2010

Gut microbiota maturation during early human life induces enterocyte proliferation via microbial metabolites

por Dougherty, Michael W., Kudin, Oleksandr, Mühlbauer, Marcus, Neu, Josef, Gharaibeh, Raad Z., Jobin, Christian
Publicado 2020

Intestinal microbiota modulates pancreatic carcinogenesis through intratumoral natural killer cells

por Yu, Qin, Newsome, Rachel C., Beveridge, Mark, Hernandez, Maria C., Gharaibeh, Raad Z., Jobin, Christian, Thomas, Ryan M.
Publicado 2022

Recent urbanization in China is correlated with a Westernized microbiome encoding increased virulence and antibiotic resistance genes

por Winglee, Kathryn, Howard, Annie Green, Sha, Wei, Gharaibeh, Raad Z., Liu, Jiawu, Jin, Donghui, Fodor, Anthony A., Gordon-Larsen, Penny
Publicado 2017

Microbial genomic analysis reveals the essential role of inflammation in bacteria-induced colorectal cancer

por Arthur, Janelle C., Gharaibeh, Raad Z., Mühlbauer, Marcus, Perez-Chanona, Ernesto, Uronis, Joshua M., McCafferty, Jonathan, Fodor, Anthony A., Jobin, Christian
Publicado 2014

VSL#3 probiotic modifies mucosal microbial composition but does not reduce colitis-associated colorectal cancer

por Arthur, Janelle C., Gharaibeh, Raad Z., Uronis, Joshua M., Perez-Chanona, Ernesto, Sha, Wei, Tomkovich, Sarah, Mühlbauer, Marcus, Fodor, Anthony A., Jobin, Christian
Publicado 2013

Mouse Gut Microbiome-Encoded β-Glucuronidases Identified Using Metagenome Analysis Guided by Protein Structure

por Creekmore, Benjamin C., Gray, Josh H., Walton, William G., Biernat, Kristen A., Little, Michael S., Xu, Yongmei, Liu, Jian, Gharaibeh, Raad Z., Redinbo, Matthew R.
Publicado 2019

Oral therapy with colonization factor antigen I prevents development of type 1 diabetes in Non-obese Diabetic mice

por Nelson, Andrew S., Maddaloni, Massimo, Abbott, Jeffrey R., Hoffman, Carol, Akgul, Ali, Ohland, Christina, Gharaibeh, Raad Z., Jobin, Christian, Brusko, Todd M., Pascual, David W.
Publicado 2020

Prolonged restraint stressor exposure in outbred CD-1 mice impacts microbiota, colonic inflammation, and short chain fatty acids

por Maltz, Ross M., Keirsey, Jeremy, Kim, Sandra C., Mackos, Amy R., Gharaibeh, Raad Z., Moore, Cathy C., Xu, Jinyu, Bakthavatchalu, Vasudevan, Somogyi, Arpad, Bailey, Michael T.
Publicado 2018

Mice Deficient in Epithelial or Myeloid Cell Iκκβ Have Distinct Colonic Microbiomes and Increased Resistance to Citrobacter rodentium Infection

por Mackos, Amy R., Allen, Jacob M., Kim, Eunsoo, Ladaika, Chris A., Gharaibeh, Raad Z., Moore, Cathy, Parry, Nicola M. A., Boyaka, Prosper N., Bailey, Michael T.
Publicado 2019

Campylobacter jejuni promotes colorectal tumorigenesis through the action of cytolethal distending toxin

por He, Zhen, Gharaibeh, Raad Z, Newsome, Rachel C, Pope, Jllian L, Dougherty, Michael W, Tomkovich, Sarah, Pons, Benoit, Mirey, Gladys, Vignard, Julien, Hendrixson, David R, Jobin, Christian
Publicado 2019

MarZIC: A Marginal Mediation Model for Zero-Inflated Compositional Mediators with Applications to Microbiome Data

por Wu, Quran, O’Malley, James, Datta, Susmita, Gharaibeh, Raad Z., Jobin, Christian, Karagas, Margaret R., Coker, Modupe O., Hoen, Anne G., Christensen, Brock C., Madan, Juliette C., Li, Zhigang
Publicado 2022

The microbial genotoxin colibactin exacerbates mismatch repair mutations in colorectal tumors

por Dougherty, Michael W., Valdés-Mas, Rafael, Wernke, Kevin M., Gharaibeh, Raad Z., Yang, Ye, Brant, Jason O., Riva, Alberto, Muehlbauer, Marcus, Elinav, Eran, Puschhof, Jens, Herzon, Seth B., Jobin, Christian
Publicado 2023

Dietary iron variably modulates assembly of the intestinal microbiota in colitis-resistant and colitis-susceptible mice

por Ellermann, Melissa, Gharaibeh, Raad Z., Maharshak, Nitsan, Peréz-Chanona, Ernesto, Jobin, Christian, Carroll, Ian M., Arthur, Janelle C., Plevy, Scott E, Fodor, Anthony A., Brouwer, Cory R., Sartor, R. Balfour
Publicado 2019

Environmental factors regulate Paneth cell phenotype and host susceptibility to intestinal inflammation in Irgm1-deficient mice

por Rogala, Allison R., Schoenborn, Alexi A., Fee, Brian E., Cantillana, Viviana A., Joyce, Maria J., Gharaibeh, Raad Z., Roy, Sayanty, Fodor, Anthony A., Sartor, R. Balfour, Taylor, Gregory A., Gulati, Ajay S.
Publicado 2018

Interaction of bacterial genera associated with therapeutic response to immune checkpoint PD-1 blockade in a United States cohort

por Newsome, Rachel C., Gharaibeh, Raad Z., Pierce, Christine M., da Silva, Wildson Vieira, Paul, Shirlene, Hogue, Stephanie R., Yu, Qin, Antonia, Scott, Conejo-Garcia, Jose R., Robinson, Lary A., Jobin, Christian
Publicado 2022