Multispacer Sequence Typing for Mycobacterium tuberculosis Genotyping

por Djelouadji, Zoheira, Arnold, Catherine, Gharbia, Saheer, Raoult, Didier, Drancourt, Michel
Publicado 2008

Comparison of single-nucleotide variants identified by Illumina and Oxford Nanopore technologies in the context of a potential outbreak of Shiga toxin–producing Escherichia coli

por Greig, David R, Jenkins, Claire, Gharbia, Saheer, Dallman, Timothy J
Publicado 2019

Phylogenetic structure of Shiga toxin-producing Escherichia coli O157:H7 from sub-lineage to SNPs

por Dallman, Timothy J., Greig, David R., Gharbia, Saheer E., Jenkins, Claire
Publicado 2021

Analysis of a small outbreak of Shiga toxin-producing Escherichia coli O157:H7 using long-read sequencing

por Greig, David R., Jenkins, Claire, Gharbia, Saheer E., Dallman, Timothy J.
Publicado 2021

Phylogenetic context of Shiga toxin-producing Escherichia coli serotype O26:H11 in England

por Dallman, Timothy J., Greig, David R., Gharbia, Saheer E., Jenkins, Claire
Publicado 2021

Evaluation of Genomic Typing Methods in the Salmonella Reference Laboratory in Public Health, England, 2012–2020

por Chattaway, Marie Anne, Painset, Anaïs, Godbole, Gauri, Gharbia, Saheer, Jenkins, Claire
Publicado 2023

Proteome analysis of serovars Typhimurium and Pullorum of Salmonella enterica subspecies I

por Encheva, Vesela, Wait, Robin, Gharbia, Saheer E, Begum, Shajna, Shah, Haroun N
Publicado 2005

Coherent pipeline for biomarker discovery using mass spectrometry and bioinformatics

por Al-Shahib, Ali, Misra, Raju, Ahmod, Nadia, Fang, Min, Shah, Haroun, Gharbia, Saheer
Publicado 2010

Correlation between Phylogroups and Intracellular Proteomes of Propionibacterium acnes and Differences in the Protein Expression Profiles between Anaerobically and Aerobically Grow...

por Dekio, Itaru, Culak, Renata, Fang, Min, Ball, Graham, Gharbia, Saheer, Shah, Haroun N.
Publicado 2013

Challenges of the Unknown: Clinical Application of Microbial Metagenomics

por Rose, Graham, Wooldridge, David J., Anscombe, Catherine, Mee, Edward T., Misra, Raju V., Gharbia, Saheer
Publicado 2015

Towards the development of a DNA-sequence based approach to serotyping of Salmonella enterica

por Mortimer, Chloe KB, Peters, Tansy M, Gharbia, Saheer E, Logan, Julie MJ, Arnold, Catherine
Publicado 2004

Use of Nanopore Sequencing to Characterise the Genomic Architecture of Mobile Genetic Elements Encoding bla(CTX-M-15) in Escherichia coli Causing Travellers’ Diarrhoea

por Bird, Matthew T., Greig, David R., Nair, Satheesh, Jenkins, Claire, Godbole, Gauri, Gharbia, Saheer E.
Publicado 2022

Complete Genome Sequences of BK Polyomavirus Strains from Two Patients with Urinary Tract Infection, Sequenced Using the Ion Torrent Platform

por Rose, Graham, Ranellou, Kyriaki, Misra, Raju, Crump, Colin, Wooldridge, David, Parmar, Surendra, Maddren, Christopher, Gharbia, Saheer, Jalal, Hamid
Publicado 2017

Understanding the impact of the COVID-19 pandemic response on GI infection surveillance trends in England, January 2020–April 2022

por Love, Nicola K., Douglas, Amy, Gharbia, Saheer, Hughes, Helen, Morbey, Roger, Oliver, Isabel, Smith, Gillian E., Elliot, Alex J.
Publicado 2023

Antibiotic resistance potential of the healthy preterm infant gut microbiome

por Rose, Graham, Shaw, Alexander G., Sim, Kathleen, Wooldridge, David J., Li, Ming-Shi, Gharbia, Saheer, Misra, Raju, Kroll, John Simon
Publicado 2017

Whole Genome Sequence and Comparative Genomics Analysis of Multi-drug Resistant Environmental Staphylococcus epidermidis ST59

por Xu, Zhen, Misra, Raju, Jamrozy, Dorota, Paterson, Gavin K., Cutler, Ronald R., Holmes, Mark A., Gharbia, Saheer, Mkrtchyan, Hermine V.
Publicado 2018

Premature neonatal gut microbial community patterns supporting an epithelial TLR-mediated pathway for necrotizing enterocolitis

por Shaw, Alexander G., Sim, Kathleen, Rose, Graham, Wooldridge, David J., Li, Ming-Shi, Misra, Raju V., Gharbia, Saheer, Kroll, J. Simon
Publicado 2021

Complete Genome Sequence of the Hypervirulent Bacterium Clostridium difficile Strain G46, Ribotype 027

por Gaulton, Tom, Misra, Raju, Rose, Graham, Baybayan, Primo, Hall, Richard, Freeman, Jane, Turton, Jane, Picton, Steve, Korlach, Jonas, Gharbia, Saheer, Shah, Haroun
Publicado 2015

Impact of the COVID-19 pandemic on gastrointestinal infection trends in England, February–July 2020

por Love, Nicola K, Elliot, Alex J, Chalmers, Rachel M, Douglas, Amy, Gharbia, Saheer, McCormick, Jacquelyn, Hughes, Helen, Morbey, Roger, Oliver, Isabel, Vivancos, Roberto, Smith, Gillian
Publicado 2022

Prevalence and Persistence of Antibiotic Resistance Determinants in the Gut of Travelers Returning to the United Kingdom is Associated with Colonization by Pathogenic Escherichia c...

por Dallman, Timothy J., Neuert, Saskia, Fernandez Turienzo, Cristina, Berin, Michelle, Richardson, Emily, Fuentes-Utrilla, Pablo, Loman, Nicholas, Gharbia, Saheer, Jenkins, Claire, Behrens, Ron H., Godbole, Gauri, Brown, Michael
Publicado 2023