An insulator element 3′ to the CFTR gene binds CTCF and reveals an active chromatin hub in primary cells

por Blackledge, Neil P., Ott, Christopher J., Gillen, Austin E., Harris, Ann
Publicado 2009

Improvements to the HITS-CLIP protocol eliminate widespread mispriming artifacts

por Gillen, Austin E., Yamamoto, Tomomi M., Kline, Enos, Hesselberth, Jay R., Kabos, Peter
Publicado 2016

LABRAT reveals association of alternative polyadenylation with transcript localization, RNA binding protein expression, transcription speed, and cancer survival

por Goering, Raeann, Engel, Krysta L., Gillen, Austin E., Fong, Nova, Bentley, David L., Taliaferro, J. Matthew
Publicado 2021

Nucleosome occupancy reveals regulatory elements of the CFTR promoter

por Ott, Christopher J., Bischof, Jared M., Unti, Kristen M., Gillen, Austin E., Leir, Shih-Hsing, Harris, Ann
Publicado 2012

Dynamic temperature-sensitive A-to-I RNA editing in the brain of a heterothermic mammal during hibernation

por Riemondy, Kent A., Gillen, Austin E., White, Emily A., Bogren, Lori K., Hesselberth, Jay R., Martin, Sandra L.
Publicado 2018

Liver Transcriptome Dynamics During Hibernation Are Shaped by a Shifting Balance Between Transcription and RNA Stability

por Gillen, Austin E., Fu, Rui, Riemondy, Kent A., Jager, Jennifer, Fang, Bin, Lazar, Mitchell A., Martin, Sandra L.
Publicado 2021

Diverse cell-specific patterns of alternative polyadenylation in Drosophila

por Lee, Seungjae, Chen, Yen-Chung, Gillen, Austin E., Taliaferro, J. Matthew, Deplancke, Bart, Li, Hongjie, Lai, Eric C.
Publicado 2022

clustifyr: an R package for automated single-cell RNA sequencing cluster classification

por Fu, Rui, Gillen, Austin E., Sheridan, Ryan M., Tian, Chengzhe, Daya, Michelle, Hao, Yue, Hesselberth, Jay R., Riemondy, Kent A.
Publicado 2020

Dynamic RNA Regulation in the Brain Underlies Physiological Plasticity in a Hibernating Mammal

por Fu, Rui, Gillen, Austin E., Grabek, Katharine R., Riemondy, Kent A., Epperson, L. Elaine, Bustamante, Carlos D., Hesselberth, Jay R., Martin, Sandra L.
Publicado 2021

Enhancing Hematopoiesis from Murine Embryonic Stem Cells through MLL1-Induced Activation of a Rac/Rho/Integrin Signaling Axis

por Yang, Weiwei, Trahan, G. Devon, Howell, Elizabeth D., Speck, Nancy A., Jones, Kenneth L., Gillen, Austin E., Riemondy, Kent, Hesselberth, Jay, Bryder, David, Ernst, Patricia
Publicado 2020

Recovery and analysis of transcriptome subsets from pooled single-cell RNA-seq libraries

por Riemondy, Kent A, Ransom, Monica, Alderman, Christopher, Gillen, Austin E, Fu, Rui, Finlay-Schultz, Jessica, Kirkpatrick, Gregory D, Di Paola, Jorge, Kabos, Peter, Sartorius, Carol A, Hesselberth, Jay R
Publicado 2019

Chronic Liver Disease in Humans Causes Expansion and Differentiation of Liver Lymphatic Endothelial Cells

por Tamburini, Beth A. Jiron, Finlon, Jeffrey M., Gillen, Austin E., Kriss, Michael S., Riemondy, Kent A., Fu, Rui, Schuyler, Ronald P., Hesselberth, Jay R., Rosen, Hugo R., Burchill, Matthew A.
Publicado 2019

Compromised nonsense-mediated RNA decay results in truncated RNA-binding protein production upon DUX4 expression

por Campbell, Amy E., Dyle, Michael C., Albanese, Roberto, Matheny, Tyler, Sudheendran, Kavitha, Cortázar, Michael A., Forman, Thomas, Fu, Rui, Gillen, Austin E., Caruthers, Marvin H., Floor, Stephen N., Calviello, Lorenzo, Jagannathan, Sujatha
Publicado 2023

Development of Novel Patient-Derived Xenografts from Breast Cancer Brain Metastases

por Contreras-Zárate, María J., Ormond, D. Ryan, Gillen, Austin E., Hanna, Colton, Day, Nicole L., Serkova, Natalie J., Jacobsen, Britta M., Edgerton, Susan M., Thor, Ann D., Borges, Virginia F., Lillehei, Kevin O., Graner, Michael W., Kabos, Peter, Cittelly, Diana M.
Publicado 2017

Single-cell RNA sequencing and binary hierarchical clustering define lung interstitial macrophage heterogeneity in response to hypoxia

por Campbell, Nzali V., Mickael, Claudia, Kumar, Sushil, Zhang, Hui, Campbell, Ian L., Gillen, Austin E., Trentin, Caio O., Diener, Katrina, Gao, Bifeng, Kheyfets, Vitaly O., Gu, Sue, Kumar, Rahul, Phang, Tzu, Brown, R. Dale, Graham, Brian B., Stenmark, Kurt R.
Publicado 2022

The Six1 oncoprotein downregulates p53 via concomitant regulation of RPL26 and microRNA-27a-3p

por Towers, Christina G., Guarnieri, Anna L., Micalizzi, Doug S., Harrell, J. Chuck, Gillen, Austin E., Kim, Jihye, Wang, Chu-An, Oliphant, Michael U.J., Drasin, David J., Guney, Michelle A., Kabos, Peter, Sartorius, Carol A., Tan, Aik-Choon, Perou, Charles M., Espinosa, Joaquin M., Ford, Heide L.
Publicado 2015

A BAC Transgene Expressing Human CFTR under Control of Its Regulatory Elements Rescues Cftr Knockout Mice

por Gawenis, Lara R., Hodges, Craig A., McHugh, Daniel R., Valerio, Dana M., Miron, Alexander, Cotton, Calvin U., Liu, Jinghua, Walker, Nancy M., Strubberg, Ashlee M., Gillen, Austin E., Mutolo, Michael J., Kotzamanis, George, Bosch, Jürgen, Harris, Ann, Drumm, Mitchell L., Clarke, Lane L.
Publicado 2019

Oxidized Low-Density Lipoprotein Drives Dysfunction of the Liver Lymphatic System

por Burchill, Matthew A., Finlon, Jeffrey M., Goldberg, Alyssa R., Gillen, Austin E., Dahms, Petra A., McMahan, Rachel H., Tye, Anne, Winter, Andrew B., Reisz, Julie A., Bohrnsen, Eric, Schafer, Johnathon B., D’Alessandro, Angelo, Orlicky, David J., Kriss, Michael S., Rosen, Hugo R., McCullough, Rebecca L., Jirón Tamburini, Beth A.
Publicado 2020