neuroConstruct: A Tool for Modeling Networks of Neurons in 3D Space

por Gleeson, Padraig, Steuber, Volker, Silver, R. Angus
Publicado 2007

Editorial: Neuroinformatics of large-scale brain modelling

por Griffiths, John D., Shen, Kelly, Gleeson, Padraig
Publicado 2022

Development of NeuroML version 2.0: greater extensibility, support for abstract neuronal models and interaction with Systems Biology languages

por Gleeson, Padraig, Crook, Sharon, Silver, Angus, Cannon, Robert
Publicado 2011

Integration of predictive-corrective incompressible SPH and Hodgkin-Huxley based models in the OpenWorm in silico model of C. elegans

por Vella, Michael, Palyanov, Andrey, Gleeson, Padraig, Khayrulin, Sergey
Publicado 2013

A declarative model specification system allowing NeuroML to be extended with user-defined component types

por Cannon, Robert, Gleeson, Padraig, Crook, Sharon, Silver, R Angus
Publicado 2012

Advanced 3D visualisation of detailed neuronal models using the Open Source Brain repository and interaction with other neuroinformatics resources

por Gleeson, Padraig, Cantarelli, Matteo, Piasini, Eugenio, Silver, R Angus
Publicado 2013

Using NeuroML and neuroConstruct to build neuronal network models for multiple simulators

por Gleeson, Padraig, Crook, Sharon, Steuber, Volker, Silver, R Angus
Publicado 2007

Synaptic integration and NMDA spikes in a layer 5 pyramidal neuron model

por Farinella, Matteo, Gleeson, Padraig, Ruidt, Daniel CT, Silver, Angus R
Publicado 2011

Glutamate-Bound NMDARs Arising from In Vivo-like Network Activity Extend Spatio-temporal Integration in a L5 Cortical Pyramidal Cell Model

por Farinella, Matteo, Ruedt, Daniel T., Gleeson, Padraig, Lanore, Frederic, Silver, R. Angus
Publicado 2014

Visualizing, editing and simulating neuronal models with the Open Source Brain 3D explorer

por Quintana, Adrian, Cantarelli, Matteo, Marin, Boris, Silver, R Angus, Gleeson, Padraig
Publicado 2015

c302: a multiscale framework for modelling the nervous system of Caenorhabditis elegans

por Gleeson, Padraig, Lung, David, Grosu, Radu, Hasani, Ramin, Larson, Stephen D.
Publicado 2018

Automated code generation from LEMS, the general purpose model specification language underpinning NeuroML2

por Marin, Boris, Gleeson, Padraig, Cantarelli, Matteo, Cannon, Robert Charles, Silver, Robin Angus
Publicado 2014

Rapid Desynchronization of an Electrically Coupled Interneuron Network with Sparse Excitatory Synaptic Input

por Vervaeke, Koen, Lőrincz, Andrea, Gleeson, Padraig, Farinella, Matteo, Nusser, Zoltan, Silver, R. Angus
Publicado 2010

NeuroML-DB: Sharing and characterizing data-driven neuroscience models described in NeuroML

por Birgiolas, Justas, Haynes, Vergil, Gleeson, Padraig, Gerkin, Richard C., Dietrich, Suzanne W., Crook, Sharon
Publicado 2023

LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2

por Cannon, Robert C., Gleeson, Padraig, Crook, Sharon, Ganapathy, Gautham, Marin, Boris, Piasini, Eugenio, Silver, R. Angus
Publicado 2014

The OpenWorm Project: currently available resources and future plans

por Gleeson, Padraig, Cantarelli, Matteo, Currie, Michael, Hokanson, Jim, Idili, Giovanni, Khayrulin, Sergey, Palyanov, Andrey, Szigeti, Balazs, Larson, Stephen
Publicado 2015

The Open Source Brain Initiative: enabling collaborative modelling in computational neuroscience

por Gleeson, Padraig, Piasini, Eugenio, Crook, Sharon, Cannon, Robert, Steuber, Volker, Jaeger, Dieter, Solinas, Sergio, D’Angelo, Egidio, Silver, R Angus
Publicado 2012

OpenWorm: an open-science approach to modeling Caenorhabditis elegans

por Szigeti, Balázs, Gleeson, Padraig, Vella, Michael, Khayrulin, Sergey, Palyanov, Andrey, Hokanson, Jim, Currie, Michael, Cantarelli, Matteo, Idili, Giovanni, Larson, Stephen
Publicado 2014

Geppetto: a reusable modular open platform for exploring neuroscience data and models

por Cantarelli, Matteo, Marin, Boris, Quintana, Adrian, Earnshaw, Matt, Court, Robert, Gleeson, Padraig, Dura-Bernal, Salvador, Silver, R. Angus, Idili, Giovanni
Publicado 2018

libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience

por Vella, Michael, Cannon, Robert C., Crook, Sharon, Davison, Andrew P., Ganapathy, Gautham, Robinson, Hugh P. C., Silver, R. Angus, Gleeson, Padraig
Publicado 2014