ProkEvo: an automated, reproducible, and scalable framework for high-throughput bacterial population genomics analyses

por Pavlovikj, Natasha, Gomes-Neto, Joao Carlos, Deogun, Jitender S., Benson, Andrew K.
Publicado 2021

Systems-Based Approach for Optimization of Assembly-Free Bacterial MLST Mapping

por Pavlovikj, Natasha, Gomes-Neto, Joao Carlos, Deogun, Jitender S., Benson, Andrew K.
Publicado 2022

Quantitative real-time polymerase chain reaction for detecting Mycoplasma hyosynoviae and Mycoplasma hyorhinis in pen-based oral, tonsillar, and nasal fluids

por Gomes Neto, João Carlos, Bower, Leslie, Erickson, Barbara Z., Wang, Chong, Raymond, Matthew, Strait, Erin L.
Publicado 2015

Genome Sequences of Uncommon Shiga Toxin-Producing Escherichia coli Serotypes

por Abdalhamid, Baha, Mccutchen, Emily L., Iwen, Peter C., Gomes-Neto, Joao Carlos, Benson, Andrew K., Hinrichs, Steven H.
Publicado 2020

Salmonella enterica induces biogeography-specific changes in the gut microbiome of pigs

por Gomes-Neto, Joao Carlos, Pavlovikj, Natasha, Korth, Nate, Naberhaus, Samantha A., Arruda, Bailey, Benson, Andrew K., Kreuder, Amanda J.
Publicado 2023

Two clinical isolates of Mycoplasma hyosynoviae showed differing pattern of lameness and pathogen detection in experimentally challenged pigs

por Gomes-Neto, João Carlos, Raymond, Matthew, Bower, Leslie, Ramirez, Alejandro, Madson, Darin M., Strait, Erin L., Rosey, Everett L., Rapp-Gabrielson, Vicki J.
Publicado 2016

A gut pathobiont synergizes with the microbiota to instigate inflammatory disease marked by immunoreactivity against other symbionts but not itself

por Gomes-Neto, João Carlos, Kittana, Hatem, Mantz, Sara, Segura Munoz, Rafael R., Schmaltz, Robert J., Bindels, Laure B., Clarke, Jennifer, Hostetter, Jesse M., Benson, Andrew K., Walter, Jens, Ramer-Tait, Amanda E.
Publicado 2017

Lifestyle and Horizontal Gene Transfer-Mediated Evolution of Mucispirillum schaedleri, a Core Member of the Murine Gut Microbiota

por Loy, Alexander, Pfann, Carina, Steinberger, Michaela, Hanson, Buck, Herp, Simone, Brugiroux, Sandrine, Gomes Neto, João Carlos, Boekschoten, Mark V., Schwab, Clarissa, Urich, Tim, Ramer-Tait, Amanda E., Rattei, Thomas, Stecher, Bärbel, Berry, David
Publicado 2017

Commensal Escherichia coli Strains Can Promote Intestinal Inflammation via Differential Interleukin-6 Production

por Kittana, Hatem, Gomes-Neto, João Carlos, Heck, Kari, Geis, Abby L., Segura Muñoz, Rafael R., Cody, Liz A., Schmaltz, Robert J., Bindels, Laure B., Sinha, Rohita, Hostetter, Jesse M., Benson, Andrew K., Ramer-Tait, Amanda E.
Publicado 2018

Captive Common Marmosets (Callithrix jacchus) Are Colonized throughout Their Lives by a Community of Bifidobacterium Species with Species-Specific Genomic Content That Can Support...

por Zhu, Lifeng, Yang, Qinnan, Suhr Van Haute, Mallory J., Kok, Car Reen, Gomes-Neto, Joao Carlos, Pavlovikj, Natasha, Pillai, Resmi, Sinha, Rohita, Hassenstab, Haley, Mustoe, Aaryn, Moriyama, Etsuko N., Hutkins, Robert, French, Jeffrey, Benson, Andrew K.
Publicado 2021

Experimental evaluation of the importance of colonization history in early-life gut microbiota assembly

por Martínez, Inés, Maldonado-Gomez, Maria X, Gomes-Neto, João Carlos, Kittana, Hatem, Ding, Hua, Schmaltz, Robert, Joglekar, Payal, Cardona, Roberto Jiménez, Marsteller, Nathan L, Kembel, Steven W, Benson, Andrew K, Peterson, Daniel A, Ramer-Tait, Amanda E, Walter, Jens
Publicado 2018

The microbiota protects from viral-induced neurologic damage through microglia-intrinsic TLR signaling

por Brown, D Garrett, Soto, Raymond, Yandamuri, Soumya, Stone, Colleen, Dickey, Laura, Gomes-Neto, Joao Carlos, Pastuzyn, Elissa D, Bell, Rickesha, Petersen, Charisse, Buhrke, Kaitlin, Fujinami, Robert S, O'Connell, Ryan M, Stephens, W Zac, Shepherd, Jason D, Lane, Thomas E, Round, June L
Publicado 2019

Resistant starch can improve insulin sensitivity independently of the gut microbiota

por Bindels, Laure B., Segura Munoz, Rafael R., Gomes-Neto, João Carlos, Mutemberezi, Valentin, Martínez, Inés, Salazar, Nuria, Cody, Elizabeth A., Quintero-Villegas, Maria I., Kittana, Hatem, de los Reyes-Gavilán, Clara G, Schmaltz, Robert J., Muccioli, Giulio G., Walter, Jens, Ramer-Tait, Amanda E.
Publicado 2017