Next-Generation Sequencing of Small RNAs from HIV-Infected Cells Identifies Phased microRNA Expression Patterns and Candidate Novel microRNAs Differentially Expressed upon Infectio...

por Chang, Stewart T., Thomas, Matthew J., Sova, Pavel, Green, Richard R., Palermo, Robert E., Katze, Michael G.
Publicado 2013

Assessment and improvement of Indian‐origin rhesus macaque and Mauritian‐origin cynomolgus macaque genome annotations using deep transcriptome sequencing data

por Peng, Xinxia, Pipes, Lenore, Xiong, Hao, Green, Richard R., Jones, Daniel C., Ruzzo, Walter L., Schroth, Gary P., Mason, Christopher E., Palermo, Robert E., Katze, Michael G.
Publicado 2014

Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

por Swanson, Elliott, Lord, Cara, Reading, Julian, Heubeck, Alexander T, Genge, Palak C, Thomson, Zachary, Weiss, Morgan DA, Li, Xiao-jun, Savage, Adam K, Green, Richard R, Torgerson, Troy R, Bumol, Thomas F, Graybuck, Lucas T, Skene, Peter J
Publicado 2021

Annotation of long non-coding RNAs expressed in Collaborative Cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts

por Josset, Laurence, Tchitchek, Nicolas, Gralinski, Lisa E, Ferris, Martin T, Eisfeld, Amie J, Green, Richard R, Thomas, Matthew J, Tisoncik-Go, Jennifer, Schroth, Gary P, Kawaoka, Yoshihiro, Pardo-Manuel de Villena, Fernando, Baric, Ralph S, Heise, Mark T, Peng, Xinxia, Katze, Michael G
Publicado 2014

Liver macrophage-associated inflammation correlates with SIV burden and is substantially reduced following cART

por Fisher, Bridget S., Green, Richard R., Brown, Rachel R., Wood, Matthew P., Hensley-McBain, Tiffany, Fisher, Cole, Chang, Jean, Miller, Andrew D., Bosche, William J., Lifson, Jeffrey D., Mavigner, Maud, Miller, Charlene J., Gale, Michael, Silvestri, Guido, Chahroudi, Ann, Klatt, Nichole R., Sodora, Donald L.
Publicado 2018

Macrophage-associated wound healing contributes to African green monkey SIV pathogenesis control

por Barrenas, Fredrik, Raehtz, Kevin, Xu, Cuiling, Law, Lynn, Green, Richard R., Silvestri, Guido, Bosinger, Steven E., Nishida, Andrew, Li, Qingsheng, Lu, Wuxun, Zhang, Jianshui, Thomas, Matthew J., Chang, Jean, Smith, Elise, Weiss, Jeffrey M., Dawoud, Reem A., Richter, George H., Trichel, Anita, Ma, Dongzhu, Peng, Xinxia, Komorowski, Jan, Apetrei, Cristian, Pandrea, Ivona, Gale, Michael
Publicado 2019

Author Correction: Macrophage-associated wound healing contributes to African green monkey SIV pathogenesis control

por Barrenas, Fredrik, Raehtz, Kevin, Xu, Cuiling, Law, Lynn, Green, Richard R., Silvestri, Guido, Bosinger, Steven E., Nishida, Andrew, Li, Qingsheng, Lu, Wuxun, Zhang, Jianshui, Thomas, Matthew J., Chang, Jean, Smith, Elise, Weiss, Jeffrey M., Dawoud, Reem A., Richter, George H., Trichel, Anita, Ma, Dongzhu, Peng, Xinxia, Komorowski, Jan, Apetrei, Cristian, Pandrea, Ivona, Gale, Michael
Publicado 2019

Interleukin-15 response signature predicts RhCMV/SIV vaccine efficacy

por Barrenäs, Fredrik, Hansen, Scott G., Law, Lynn, Driscoll, Connor, Green, Richard R., Smith, Elise, Chang, Jean, Golez, Inah, Urion, Taryn, Peng, Xinxia, Whitmore, Leanne, Newhouse, Daniel, Hughes, Colette M., Morrow, David, Randall, Kurt T., Selseth, Andrea N., Ford, Julia C., Gilbride, Roxanne M., Randall, Bryan E., Ainslie, Emily, Oswald, Kelli, Shoemaker, Rebecca, Fast, Randy, Bosche, William J., Axthelm, Michael K., Fukazawa, Yoshinori, Pavlakis, George N., Felber, Barbara K., Fourati, Slim, Sekaly, Rafick-Pierre, Lifson, Jeffrey D., Komorowski, Jan, Kosmider, Ewelina, Shao, Danica, Song, Wenjun, Edlefsen, Paul T., Picker, Louis J., Gale, Michael
Publicado 2021

A comprehensive collection of systems biology data characterizing the host response to viral infection

por Aevermann, Brian D., Pickett, Brett E., Kumar, Sanjeev, Klem, Edward B., Agnihothram, Sudhakar, Askovich, Peter S., Bankhead, Armand, Bolles, Meagen, Carter, Victoria, Chang, Jean, Clauss, Therese R.W., Dash, Pradyot, Diercks, Alan H., Eisfeld, Amie J., Ellis, Amy, Fan, Shufang, Ferris, Martin T., Gralinski, Lisa E., Green, Richard R., Gritsenko, Marina A., Hatta, Masato, Heegel, Robert A., Jacobs, Jon M., Jeng, Sophia, Josset, Laurence, Kaiser, Shari M., Kelly, Sara, Law, G. Lynn, Li, Chengjun, Li, Jiangning, Long, Casey, Luna, Maria L., Matzke, Melissa, McDermott, Jason, Menachery, Vineet, Metz, Thomas O., Mitchell, Hugh, Monroe, Matthew E., Navarro, Garnet, Neumann, Gabriele, Podyminogin, Rebecca L., Purvine, Samuel O., Rosenberger, Carrie M., Sanders, Catherine J., Schepmoes, Athena A., Shukla, Anil K., Sims, Amy, Sova, Pavel, Tam, Vincent C., Tchitchek, Nicolas, Thomas, Paul G., Tilton, Susan C., Totura, Allison, Wang, Jing, Webb-Robertson, Bobbie-Jo, Wen, Ji, Weiss, Jeffrey M., Yang, Feng, Yount, Boyd, Zhang, Qibin, McWeeney, Shannon, Smith, Richard D., Waters, Katrina M., Kawaoka, Yoshihiro, Baric, Ralph, Aderem, Alan, Katze, Michael G., Scheuermann, Richard H.
Publicado 2014