Revised iCLIP-seq Protocol for Profiling RNA–protein Interaction Sites at Individual Nucleotide Resolution in Living Cells

por Nabeel-Shah, Syed, Greenblatt, Jack F.
Publicado 2023

RIPSeeker: a statistical package for identifying protein-associated transcripts from RIP-seq experiments

por Li, Yue, Zhao, Dorothy Yanling, Greenblatt, Jack F., Zhang, Zhaolei
Publicado 2013

Association with the origin recognition complex suggests a novel role for histone acetyltransferase Hat1p/Hat2p

por Suter, Bernhard, Pogoutse, Oxana, Guo, Xinghua, Krogan, Nevan, Lewis, Peter, Greenblatt, Jack F, Rine, Jasper, Emili, Andrew
Publicado 2007

Interaction of the Deubiquitinating Enzyme Ubp2 and the E3 Ligase Rsp5 Is Required for Transporter/Receptor Sorting in the Multivesicular Body Pathway

por Lam, Mandy H. Y., Urban-Grimal, Danièle, Bugnicourt, Amandine, Greenblatt, Jack F., Haguenauer-Tsapis, Rosine, Emili, Andrew
Publicado 2009

Hsp110 is required for spindle length control

por Makhnevych, Taras, Wong, Philip, Pogoutse, Oxana, Vizeacoumar, Franco J., Greenblatt, Jack F., Emili, Andrew, Houry, Walid A.
Publicado 2012

The MoxR ATPase RavA and Its Cofactor ViaA Interact with the NADH:Ubiquinone Oxidoreductase I in Escherichia coli

por Wong, Keith S., Snider, Jamie D., Graham, Chris, Greenblatt, Jack F., Emili, Andrew, Babu, Mohan, Houry, Walid A.
Publicado 2014

A crucial RNA-binding lysine residue in the Nab3 RRM domain undergoes SET1 and SET3-responsive methylation

por Lee, Kwan Yin, Chopra, Anand, Burke, Giovanni L, Chen, Ziyan, Greenblatt, Jack F, Biggar, Kyle K, Meneghini, Marc D
Publicado 2020

Systems-level analyses identify extensive coupling among gene expression machines

por Maciag, Karolina, Altschuler, Steven J, Slack, Michael D, Krogan, Nevan J, Emili, Andrew, Greenblatt, Jack F, Maniatis, Tom, Wu, Lani F
Publicado 2006

A unified model for yeast transcript definition

por de Boer, Carl G., van Bakel, Harm, Tsui, Kyle, Li, Joyce, Morris, Quaid D., Nislow, Corey, Greenblatt, Jack F., Hughes, Timothy R.
Publicado 2014

G9a and ZNF644 Physically Associate to Suppress Progenitor Gene Expression during Neurogenesis

por Olsen, Jonathan B., Wong, Loksum, Deimling, Steven, Miles, Amanda, Guo, Hongbo, Li, Yue, Zhang, Zhaolei, Greenblatt, Jack F., Emili, Andrew, Tropepe, Vincent
Publicado 2016

Changes in SUMO-modified proteins in Epstein-Barr virus infection identifies reciprocal regulation of TRIM24/28/33 complexes and the lytic switch BZLF1

por De La Cruz-Herrera, Carlos F., Tatham, Michael H., Siddiqi, Umama Z., Shire, Kathy, Marcon, Edyta, Greenblatt, Jack F., Hay, Ronald T., Frappier, Lori
Publicado 2023

The Program for Processing Newly-synthesized Histones H3.1 and H4

por Campos, Eric I., Fillingham, Jeffrey, Li, Guohong, Zheng, Haiyan, Voigt, Philipp, Kuo, Wei-Hung W., Seepany, Harshika, Gao, Zhonghua, Day, Loren A., Greenblatt, Jack F., Reinberg, Danny
Publicado 2010

Ribosome-Dependent ATPase Interacts with Conserved Membrane Protein in Escherichia coli to Modulate Protein Synthesis and Oxidative Phosphorylation

por Babu, Mohan, Aoki, Hiroyuki, Chowdhury, Wasimul Q., Gagarinova, Alla, Graham, Chris, Phanse, Sadhna, Laliberte, Ben, Sunba, Noor, Jessulat, Matthew, Golshani, Ashkan, Emili, Andrew, Greenblatt, Jack F., Ganoza, M. Clelia
Publicado 2011

Multilevel interrogation of H3.3 reveals a primordial role in transcription regulation

por Nabeel-Shah, Syed, Garg, Jyoti, Ashraf, Kanwal, Jeyapala, Renu, Lee, Hyunmin, Petrova, Alexandra, Burns, James D., Pu, Shuye, Zhang, Zhaolei, Greenblatt, Jack F., Pearlman, Ronald E., Lambert, Jean-Philippe, Fillingham, Jeffrey
Publicado 2023

Multiparameter functional diversity of human C2H2 zinc finger proteins

por Schmitges, Frank W., Radovani, Ernest, Najafabadi, Hamed S., Barazandeh, Marjan, Campitelli, Laura F., Yin, Yimeng, Jolma, Arttu, Zhong, Guoqing, Guo, Hongbo, Kanagalingam, Tharsan, Dai, Wei F., Taipale, Jussi, Emili, Andrew, Greenblatt, Jack F., Hughes, Timothy R.
Publicado 2016

An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe

por Kim, Hyun-Soo, Vanoosthuyse, Vincent, Fillingham, Jeffrey, Roguev, Assen, Watt, Stephen, Kislinger, Thomas, Treyer, Alex, Carpenter, Laura Rocco, Bennett, Christopher S., Emili, Andrew, Greenblatt, Jack F., Hardwick, Kevin G., Krogan, Nevan J., Bähler, Jürg, Keogh, Michael-Christopher
Publicado 2009

SARS-CoV-2 nucleocapsid protein binds host mRNAs and attenuates stress granules to impair host stress response

por Nabeel-Shah, Syed, Lee, Hyunmin, Ahmed, Nujhat, Burke, Giovanni L., Farhangmehr, Shaghayegh, Ashraf, Kanwal, Pu, Shuye, Braunschweig, Ulrich, Zhong, Guoqing, Wei, Hong, Tang, Hua, Yang, Jianyi, Marcon, Edyta, Blencowe, Benjamin J., Zhang, Zhaolei, Greenblatt, Jack F.
Publicado 2021

Functional characterization of RebL1 highlights the evolutionary conservation of oncogenic activities of the RBBP4/7 orthologue in Tetrahymena thermophila

por Nabeel-Shah, Syed, Garg, Jyoti, Saettone, Alejandro, Ashraf, Kanwal, Lee, Hyunmin, Wahab, Suzanne, Ahmed, Nujhat, Fine, Jacob, Derynck, Joanna, Pu, Shuye, Ponce, Marcelo, Marcon, Edyta, Zhang, Zhaolei, Greenblatt, Jack F, Pearlman, Ronald E, Lambert, Jean-Philippe, Fillingham, Jeffrey
Publicado 2021

The amino acid sensor GCN2 suppresses terminal oligopyrimidine (TOP) mRNA translation via La-related protein 1 (LARP1)

por Farooq, Zeenat, Kusuma, Fedho, Burke, Phillip, Dufour, Catherine R., Lee, Duckgue, Tabatabaei, Negar, Toboz, Phoenix, Radovani, Ernest, Greenblatt, Jack F., Rehman, Jalees, Class, Jacob, Khoutorsky, Arkady, Fonseca, Bruno D., Richner, Justin M., Mercier, Eloi, Bourque, Guillaume, Giguère, Vincent, Subramaniam, Arvind R., Han, Jaeseok, Tahmasebi, Soroush
Publicado 2022

A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II

por Liu, Yanli, Iqbal, Aman, Li, Weiguo, Ni, Zuyao, Wang, Yalong, Ramprasad, Jurupula, Abraham, Karan Joshua, Zhang, Mengmeng, Zhao, Dorothy Yanling, Qin, Su, Loppnau, Peter, Jiang, Honglv, Guo, Xinghua, Brown, Peter J., Zhen, Xuechu, Xu, Guoqiang, Mekhail, Karim, Ji, Xingyue, Bedford, Mark T., Greenblatt, Jack F., Min, Jinrong
Publicado 2022