The future of sequencing: convergence of intelligent design and market Darwinism

por Greenleaf, William J, Sidow, Arend
Publicado 2014

High‐resolution mapping of cancer cell networks using co‐functional interactions

por Boyle, Evan A, Pritchard, Jonathan K, Greenleaf, William J
Publicado 2018

High-throughput single-cell chromatin accessibility CRISPR screens enable unbiased identification of regulatory networks in cancer

por Pierce, Sarah E., Granja, Jeffrey M., Greenleaf, William J.
Publicado 2021

The landscape of the histone-organized chromatin of Bdellovibrionota bacteria

por Marinov, Georgi K., Doughty, Benjamin, Kundaje, Anshul, Greenleaf, William J.
Publicado 2023

Fluorogenic DNA Sequencing in PDMS Microreactors

por Sims, Peter A., Greenleaf, William J., Duan, Haifeng, Xie, X. Sunney
Publicado 2011

chromVAR: Inferring transcription factor-associated accessibility from single-cell epigenomic data

por Schep, Alicia N., Wu, Beijing, Buenrostro, Jason D., Greenleaf, William J.
Publicado 2017

Brief Report: Cell Cycle Dynamics of Human Pluripotent Stem Cells Primed for Differentiation

por Shcherbina, Anna, Li, Jingling, Narayanan, Cyndhavi, Greenleaf, William, Kundaje, Anshul, Chetty, Sundari
Publicado 2019

Comprehensive sequence-to-function mapping of cofactor-dependent RNA catalysis in the glmS ribozyme

por Andreasson, Johan O. L., Savinov, Andrew, Block, Steven M., Greenleaf, William J.
Publicado 2020

Demonstration of protein cooperativity mediated by RNA structure using the human protein PUM2

por Becker, Winston R., Jarmoskaite, Inga, Vaidyanathan, Pavanapuresan P., Greenleaf, William J., Herschlag, Daniel
Publicado 2019

Automated Design of Diverse Stand-Alone Riboswitches

por Wu, Michelle J., Andreasson, Johan O. L., Kladwang, Wipapat, Greenleaf, William, Das, Rhiju
Publicado 2019

Dissecting the energetic architecture within an RNA tertiary structural motif via high-throughput thermodynamic measurements

por Shin, John H., Bonilla, Steve L., Denny, Sarah K., Greenleaf, William J., Herschlag, Daniel
Publicado 2023

The chromatin landscape of the euryarchaeon Haloferax volcanii

por Marinov, Georgi K., Bagdatli, S. Tansu, Wu, Tong, He, Chuan, Kundaje, Anshul, Greenleaf, William J.
Publicado 2023

An optimized ATAC-seq protocol for genome-wide mapping of active regulatory elements in primary mouse cortical neurons

por Maor-Nof, Maya, Shipony, Zohar, Marinov, Georgi K., Greenleaf, William J., Gitler, Aaron D.
Publicado 2021

Global mapping of RNA-chromatin contacts reveals a proximity-dominated connectivity model for ncRNA-gene interactions

por Limouse, Charles, Smith, Owen K., Jukam, David, Fryer, Kelsey A., Greenleaf, William J., Straight, Aaron F.
Publicado 2023

Genome-wide distribution of 5-hydroxymethyluracil and chromatin accessibility in the Breviolum minutum genome

por Marinov, Georgi K., Chen, Xinyi, Swaffer, Matthew P., Xiang, Tingting, Grossman, Arthur R., Greenleaf, William J.
Publicado 2023

Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions

por Schep, Alicia N., Buenrostro, Jason D., Denny, Sarah K., Schwartz, Katja, Sherlock, Gavin, Greenleaf, William J.
Publicado 2015

Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans

por Daugherty, Aaron C., Yeo, Robin W., Buenrostro, Jason D., Greenleaf, William J., Kundaje, Anshul, Brunet, Anne
Publicado 2017

Transcription-dependent domain-scale three-dimensional genome organization in the dinoflagellate Breviolum minutum

por Marinov, Georgi K., Trevino, Alexandro E., Xiang, Tingting, Kundaje, Anshul, Grossman, Arthur R., Greenleaf, William J.
Publicado 2021

Generation of a dual edited human induced pluripotent stem cell Myl7-GFP reporter line with inducible CRISPRi/dCas9

por Metzl-Raz, Eyal, Bharucha, Nike, Ataam, Jennifer Arthur, Gavidia, Alexandra A., Greenleaf, William J., Karakikes, Ioannis
Publicado 2022

Quantification of Cas9 binding and cleavage across diverse guide sequences maps landscapes of target engagement

por Boyle, Evan A., Becker, Winston R., Bai, Hua B., Chen, Janice S., Doudna, Jennifer A., Greenleaf, William J.
Publicado 2021