A Shiga Toxin-Encoding Prophage Recombination Event Confounds the Phylogenetic Relationship Between Two Isolates of Escherichia coli O157:H7 From the Same Patient

por Greig, David R., Jenkins, Claire, Dallman, Timothy J.
Publicado 2020

Comparison of single-nucleotide variants identified by Illumina and Oxford Nanopore technologies in the context of a potential outbreak of Shiga toxin–producing Escherichia coli

por Greig, David R, Jenkins, Claire, Gharbia, Saheer, Dallman, Timothy J
Publicado 2019

MinION nanopore sequencing identifies the position and structure of bacterial antibiotic resistance determinants in a multidrug-resistant strain of enteroaggregative Escherichia co...

por Greig, David R., Dallman, Timothy J., Hopkins, Katie L., Jenkins, Claire
Publicado 2018

Phylogenetic structure of Shiga toxin-producing Escherichia coli O157:H7 from sub-lineage to SNPs

por Dallman, Timothy J., Greig, David R., Gharbia, Saheer E., Jenkins, Claire
Publicado 2021

Analysis of a small outbreak of Shiga toxin-producing Escherichia coli O157:H7 using long-read sequencing

por Greig, David R., Jenkins, Claire, Gharbia, Saheer E., Dallman, Timothy J.
Publicado 2021

Phylogenetic context of Shiga toxin-producing Escherichia coli serotype O26:H11 in England

por Dallman, Timothy J., Greig, David R., Gharbia, Saheer E., Jenkins, Claire
Publicado 2021

Analysis Shiga Toxin-Encoding Bacteriophage in a Rare Strain of Shiga Toxin-Producing Escherichia coli O157:H7 stx2a/stx2c

por Greig, David R., Mikhail, Amy F. W., Dallman, Timothy J., Jenkins, Claire
Publicado 2020

Comparison of Shiga toxin-encoding bacteriophages in highly pathogenic strains of Shiga toxin-producing Escherichia coli O157:H7 in the UK

por Yara, Daniel A., Greig, David R., Gally, David L., Dallman, Timothy J., Jenkins, Claire
Publicado 2020

Acquisition and loss of CTX-M plasmids in Shigella species associated with MSM transmission in the UK

por Locke, Rebecca K., Greig, David R., Jenkins, Claire, Dallman, Tim J., Cowley, Lauren A.
Publicado 2021

Use of Nanopore Sequencing to Characterise the Genomic Architecture of Mobile Genetic Elements Encoding bla(CTX-M-15) in Escherichia coli Causing Travellers’ Diarrhoea

por Bird, Matthew T., Greig, David R., Nair, Satheesh, Jenkins, Claire, Godbole, Gauri, Gharbia, Saheer E.
Publicado 2022

The emerging importance of Shiga toxin-producing Escherichia coli other than serogroup O157 in England

por Vishram, Bhavita, Jenkins, Claire, Greig, David R., Godbole, Gauri, Carroll, Kevin, Balasegaram, Sooria, Byrne, Lisa
Publicado 2021

Whole-Genome Sequencing for National Surveillance of Shigella flexneri

por Chattaway, Marie A., Greig, David R., Gentle, Amy, Hartman, Hassan B., Dallman, Timothy J., Jenkins, Claire
Publicado 2017

Characterization of a P1-bacteriophage-like plasmid (phage-plasmid) harbouring bla (CTX-M-15) in Salmonella enterica serovar Typhi

por Greig, David R., Bird, Matthew T., Chattaway, Marie Anne, Langridge, Gemma C., Waters, Emma V., Ribeca, Paolo, Jenkins, Claire, Nair, Satheesh
Publicado 2022

Utility of whole-genome sequencing during an investigation of multiple foodborne outbreaks of Shigella sonnei

por Mikhail, Amy F. W., Pereboom, Monique, Utsi, Lara, Hawker, Jeremy, Lighthill, Jonathan, Aird, Heather, Swindlehurst, Mark, Greig, David R., Jenkins, Claire, Godbole, Gauri, Elson, Richard
Publicado 2021

Evidence of on-going transmission of Shiga toxin-producing Escherichia coli O157:H7 following a foodborne outbreak

por Butt, Saira, Smith-Palmer, Alison, Shand, Allan, McDonald, Eisin, Allison, Lesley, Maund, Jane, Fernandes, Anand, Vishram, Bhavita, Greig, David R., Jenkins, Claire, Elson, Richard
Publicado 2021

Epidemiological investigations identified an outbreak of Shiga toxin-producing Escherichia coli serotype O26:H11 associated with pre-packed sandwiches

por Butt, Saira, Allison, Lesley, Vishram, Bhavita, Greig, David R., Aird, Heather, McDonald, Eisin, Drennan, Genna, Jenkins, Claire, Byrne, Lisa, Licence, Kirsty, Smith-Palmer, Alison
Publicado 2021

Foodborne Outbreak of Extended Spectrum Beta-lactamase Producing Shigella sonnei Associated with Contaminated Spring Onions in the United Kingdom

por Jenkins, Claire, Griffith, Philippa, Hoban, Ann, Brown, Claire, Garner, Joanna, Bardsley, Megan, Willis, Caroline, Jorgensen, Frieda, Bird, Matthew, Greig, David R., Edmunds, Matt, Beck, Charles, Larkin, Lesley
Publicado 2023

Outbreak of STEC O157:H7 linked to a milk pasteurisation failure at a dairy farm in England, 2019

por Jenkins, Claire, Bird, Philippa K., Wensley, Adrian, Wilkinson, Jarrod, Aird, Heather, Mackintosh, Adrienne, Greig, David R., Simpson, Alex, Byrne, Lisa, Wilkinson, Rachel, Godbole, Gauri, Arunachalam, Nachi, Hughes, Gareth J.
Publicado 2022

The characterization of mobile colistin resistance (mcr) genes among 33 000 Salmonella enterica genomes from routine public health surveillance in England

por Sia, Cheryll M., Greig, David R., Day, Martin, Hartman, Hassan, Painset, Anais, Doumith, Michel, Meunier, Daniele, Jenkins, Claire, Chattaway, Marie Anne, Hopkins, Katie L., Woodford, Neil, Godbole, Gauri, Dallman, Timothy J.
Publicado 2020

Tracing Back the Evolutionary Route of Enteroinvasive Escherichia coli (EIEC) and Shigella Through the Example of the Highly Pathogenic O96:H19 EIEC Clone

por Michelacci, Valeria, Tozzoli, Rosangela, Arancia, Silvia, D'Angelo, Alfio, Boni, Arianna, Knijn, Arnold, Prosseda, Gianni, Greig, David R., Jenkins, Claire, Camou, Teresa, Sirok, Alfredo, Navarro, Armando, Schelotto, Felipe, Varela, Gustavo, Morabito, Stefano
Publicado 2020