2317. Persistent Bacterial Carriage and Hospital Transmission Detected by Whole Genome Sequence Surveillance

por Sundermann, Alexander, Griffith, Marissa, Waggle, Kady, Snyder, Graham, Van Tyne, Daria, Marsh, Jane, Harrison, Lee
Publicado 2023

Whole-genome sequencing cluster analysis reveals complex healthcare-associated COVID-19 dynamics

por Rader, Theodore, Snyder, Graham, Harrison, Lee, Srinivasa, Vatsala Rangachar, Griffith, Marissa, Pless, Lora, Chung, Ashley
Publicado 2023

Research and implementation of a whole-genome sequencing surveillance system for outbreak detection

por Sundermann, Alexander, Griffith, Marissa, Srinivasa, Vatsala Rangachar, Waggle, Kady, Saul, Melissa, Ayres, Ashley, Snyder, Graham, Marsh, Jane, Harrison, Lee
Publicado 2022

Impact of ompk36 genotype and KPC subtype on the in vitro activity of ceftazidime/avibactam, imipenem/relebactam and meropenem/vaborbactam against KPC-producing K. pneumoniae clini...

por Rogers, Tara M, Kline, Ellen G, Griffith, Marissa P, Jones, Chelsea E, Rubio, Abigail M, Squires, Kevin M, Shields, Ryan K
Publicado 2023

Mutations in ompK36 differentially impact in vitro synergy of meropenem/vaborbactam and ceftazidime/avibactam in combination with other antibiotics against KPC-producing Klebsiella...

por Rogers, Tara M, Kline, Ellen G, Griffith, Marissa P, Jones, Chelsea E, Rubio, Abigail M, Squires, Kevin M, Shields, Ryan K
Publicado 2023

Empirically derived sequence similarity thresholds to study the genomic epidemiology of plasmids shared among healthcare-associated bacterial pathogens

por Evans, Daniel, Sundermann, Alexander, Griffith, Marissa, Rangachar Srinivasa, Vatsala, Mustapha, Mustapha, Chen, Jieshi, Dubrawski, Artur, Cooper, Vaughn, Harrison, Lee, Van Tyne, Daria
Publicado 2023

Impact of discontinuation of contact precautions on surveillance- and whole-genome sequencing-defined MRSA infections

por Karunakaran, Sharon, Pless, Lora, Ayres, Ashley, Ciccone, Carl, Penzelik, Joseph, Sundermann, Alexander, Martin, Elise, Griffith, Marissa, Waggle, Kady, Harrison, Lee, Snyder, Graham
Publicado 2023

Real-time whole-genome sequencing surveillance for outbreak detection and intervention

por Sundermann, Alexander, Griffith, Marissa, Srinivasa, Vatsala Rangachar, Waggle, Kady, Marsh, Jane, Tyne, Daria Van, Ayres, Ashley, Pless, Lora, Snyder, Graham, Harrison, Lee
Publicado 2023

SARS-CoV-2 N gene mutations impact detection by clinical molecular diagnostics: reports in two cities in the United States

por Leelawong, Mindy, Mitchell, Stephanie L., Fowler, Randal C., Gonzalez, Edimarlyn, Hughes, Scott, Griffith, Marissa P., Marsh, Jane W., Harrison, Lee H., Rakeman, Jennifer L.
Publicado 2021

Convergent Evolution of Antibiotic Tolerance in Patients with Persistent Methicillin-Resistant Staphylococcus aureus Bacteremia

por Elgrail, Mitra M., Chen, Edwin, Shaffer, Marla G., Srinivasa, Vatsala, Griffith, Marissa P., Mustapha, Mustapha M., Shields, Ryan K., Van Tyne, Daria, Culyba, Matthew J.
Publicado 2022

Two artificial tears outbreak-associated cases of XDR Pseudomonas aeruginosa detected through whole genome sequencing-based surveillance

por Sundermann, Alexander J., Srinivasa, Vatsala Rangachar, Mills, Emma G., Griffith, Marissa P., Waggle, Kady D., Ayres, Ashley M., Pless, Lora, Snyder, Graham M., Harrison, Lee H., Van Tyne, Daria
Publicado 2023

Systematic detection of horizontal gene transfer across genera among multidrug-resistant bacteria in a single hospital

por Evans, Daniel R, Griffith, Marissa P, Sundermann, Alexander J, Shutt, Kathleen A, Saul, Melissa I, Mustapha, Mustapha M, Marsh, Jane W, Cooper, Vaughn S, Harrison, Lee H, Van Tyne, Daria
Publicado 2020

Clinical and Genomic Epidemiology of Carbapenem-Nonsusceptible Citrobacter spp. at a Tertiary Health Care Center over 2 Decades

por Babiker, Ahmed, Evans, Daniel R., Griffith, Marissa P., McElheny, Christi L., Hassan, Mohamed, Clarke, Lloyd G., Mettus, Roberta T., Harrison, Lee H., Doi, Yohei, Shields, Ryan K., Van Tyne, Daria
Publicado 2020

Predictive model for severe COVID-19 using SARS-CoV-2 whole-genome sequencing and electronic health record data, March 2020-May 2021

por Zhu, Lei, Marsh, Jane W., Griffith, Marissa P., Collins, Kevin, Srinivasa, Vatsala, Waggle, Kady, Van Tyne, Daria, Snyder, Graham M., Phan, Tung, Wells, Alan, Marroquin, Oscar C., Harrison, Lee H.
Publicado 2022

Genomic characterization of SARS-CoV-2 from vaccine breakthrough cases in Allegheny County, Pennsylvania

por Waggle, Kady D., Griffith, Marissa P., Zhu, Lei, Cooper, Vaughn S., Snyder, Daniel J., Srinivasa, Vatsala, Phan, Tung, Wells, Alan, Snyder, Graham M., Van Tyne, Daria, Harrison, Lee H., Marsh, Jane W.
Publicado 2022

Genomic Diversity of Hospital-Acquired Infections Revealed through Prospective Whole-Genome Sequencing-Based Surveillance

por Mustapha, Mustapha M., Srinivasa, Vatsala R., Griffith, Marissa P., Cho, Shu-Ting, Evans, Daniel R., Waggle, Kady, Ezeonwuka, Chinelo, Snyder, Daniel J., Marsh, Jane W., Harrison, Lee H., Cooper, Vaughn S., Van Tyne, Daria
Publicado 2022

Genomic Epidemiologic Investigation of a Multispecies Hospital Outbreak of NDM-5-Producing Enterobacterales Infections

por Raabe, Nathan J., Valek, Abby L., Griffith, Marissa P., Mills, Emma, Waggle, Kady, Srinivasa, Vatsala Rangachar, Ayres, Ashley M., Bradford, Claire, Creager, Hannah, Pless, Lora L., Sundermann, Alexander J., Van Tyne, Daria, Snyder, Graham M., Harrison, Lee H.
Publicado 2023

Evolution of Outbreak-Causing Carbapenem-Resistant Klebsiella pneumoniae ST258 at a Tertiary Care Hospital over 8 Years

por Marsh, Jane W., Mustapha, Mustapha M., Griffith, Marissa P., Evans, Daniel R., Ezeonwuka, Chinelo, Pasculle, A. William, Shutt, Kathleen A., Sundermann, Alexander, Ayres, Ashley M., Shields, Ryan K., Babiker, Ahmed, Cooper, Vaughn S., Van Tyne, Daria, Harrison, Lee H.
Publicado 2019

Two Cases of Newly Characterized Neisseria Species, Brazil

por Mustapha, Mustapha M., Lemos, Ana Paula S., Griffith, Marissa P., Evans, Daniel R., Marx, Ramon, Coltro, Elizabeth S.F., Siebra, Christian A., Timm, Loeci, Ribeiro, Hamilton, Monteiro, Alessandro, Pasculle, A. William, Marsh, Jane W., Van Tyne, Daria, Harrison, Lee H., Sacchi, Claudio T.
Publicado 2020

Carbapenem-Resistant Acinetobacter baumannii in U.S. Hospitals: Diversification of Circulating Lineages and Antimicrobial Resistance

por Iovleva, Alina, Mustapha, Mustapha M., Griffith, Marissa P., Komarow, Lauren, Luterbach, Courtney, Evans, Daniel R., Cober, Eric, Richter, Sandra S., Rydell, Kirsten, Arias, Cesar A., Jacob, Jesse T., Salata, Robert A., Satlin, Michael J., Wong, Darren, Bonomo, Robert A., van Duin, David, Cooper, Vaughn S., Van Tyne, Daria, Doi, Yohei
Publicado 2022