Three Bacterial DedA Subfamilies with Distinct Functions and Phylogenetic Distribution

por Todor, Horia, Herrera, Nadia, Gross, Carol A.
Publicado 2023

Global analysis of translation termination in E. coli

por Baggett, Natalie E., Zhang, Yan, Gross, Carol A.
Publicado 2017

Predicting the strength of UP-elements and full-length E. coli σ(E) promoters

por Rhodius, Virgil A., Mutalik, Vivek K., Gross, Carol A.
Publicado 2012

Computational pipeline for designing guide RNAs for mismatch-CRISPRi

por van Gestel, Jordi, Hawkins, John S., Todor, Horia, Gross, Carol A.
Publicado 2021

Conserved and Variable Functions of the σ(E) Stress Response in Related Genomes

por Rhodius, Virgil A, Suh, Won Chul, Nonaka, Gen, West, Joyce, Gross, Carol A
Publicado 2006

Operon mRNAs are organized into ORF-centric structures that predict translation efficiency

por Burkhardt, David H, Rouskin, Silvi, Zhang, Yan, Li, Gene-Wei, Weissman, Jonathan S, Gross, Carol A
Publicado 2017

MicL, a new σ(E)-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein

por Guo, Monica S., Updegrove, Taylor B., Gogol, Emily B., Shabalina, Svetlana A., Gross, Carol A., Storz, Gisela
Publicado 2014

A Chemical-Genomic Screen of Neglected Antibiotics Reveals Illicit Transport of Kasugamycin and Blasticidin S

por Shiver, Anthony L., Osadnik, Hendrik, Kritikos, George, Li, Bo, Krogan, Nevan, Typas, Athanasios, Gross, Carol A.
Publicado 2016

Correction: A Chemical-Genomic Screen of Neglected Antibiotics Reveals Illicit Transport of Kasugamycin and Blasticidin S

por Shiver, Anthony L., Osadnik, Hendrik, Kritikos, George, Li, Bo, Krogan, Nevan, Typas, Athanasios, Gross, Carol A.
Publicado 2017

Rewiring the specificity of extracytoplasmic function sigma factors

por Todor, Horia, Osadnik, Hendrik, Campbell, Elizabeth A., Myers, Kevin S., Li, Hao, Donohue, Timothy J., Gross, Carol A.
Publicado 2020

The context of the ribosome binding site in mRNAs defines specificity of action of kasugamycin, an inhibitor of translation initiation

por Zhang, Yan, Aleksashin, Nikolay A., Klepacki, Dorota, Anderson, Caleb, Vázquez-Laslop, Nora, Gross, Carol A., Mankin, Alexander S.
Publicado 2022

Resistance to serine in Bacillus subtilis: identification of the serine transporter YbeC and of a metabolic network that links serine and threonine metabolism

por Klewing, Anika, Koo, Byoung‐Mo, Krüger, Larissa, Poehlein, Anja, Reuß, Daniel, Daniel, Rolf, Gross, Carol A., Stülke, Jörg
Publicado 2020

Module-Based Analysis of Robustness Tradeoffs in the Heat Shock Response System

por Kurata, Hiroyuki, El-Samad, Hana, Iwasaki, Rei, Ohtake, Hisao, Doyle, John C, Grigorova, Irina, Gross, Carol A, Khammash, Mustafa
Publicado 2006

Heat Shock Transcription Factor σ(32) Co-opts the Signal Recognition Particle to Regulate Protein Homeostasis in E. coli

por Lim, Bentley, Miyazaki, Ryoji, Neher, Saskia, Siegele, Deborah A., Ito, Koreaki, Walter, Peter, Akiyama, Yoshinori, Yura, Takashi, Gross, Carol A.
Publicado 2013

Expansion and re-classification of the extracytoplasmic function (ECF) σ factor family

por Casas-Pastor, Delia, Müller, Raphael R, Jaenicke, Sebastian, Brinkrolf, Karina, Becker, Anke, Buttner, Mark J, Gross, Carol A, Mascher, Thorsten, Goesmann, Alexander, Fritz, Georg
Publicado 2021

Topoisomerase IV can functionally replace all type 1A topoisomerases in Bacillus subtilis

por Reuß, Daniel R, Faßhauer, Patrick, Mroch, Philipp Joel, Ul-Haq, Inam, Koo, Byoung-Mo, Pöhlein, Anja, Gross, Carol A, Daniel, Rolf, Brantl, Sabine, Stülke, Jörg
Publicado 2019

Design of orthogonal genetic switches based on a crosstalk map of σs, anti-σs, and promoters

por Rhodius, Virgil A, Segall-Shapiro, Thomas H, Sharon, Brian D, Ghodasara, Amar, Orlova, Ekaterina, Tabakh, Hannah, Burkhardt, David H, Clancy, Kevin, Peterson, Todd C, Gross, Carol A, Voigt, Christopher A
Publicado 2013

Titrating gene expression using libraries of systematically attenuated CRISPR guide RNAs

por Jost, Marco, Santos, Daniel A., Saunders, Reuben A., Horlbeck, Max A., Hawkins, John S., Scaria, Sonia M., Norman, Thomas M., Hussmann, Jeffrey A., Liem, Christina R., Gross, Carol A., Weissman, Jonathan S.
Publicado 2020

Morphological and Transcriptional Responses to CRISPRi Knockdown of Essential Genes in Escherichia coli

por Silvis, Melanie R., Rajendram, Manohary, Shi, Handuo, Osadnik, Hendrik, Gray, Andrew N., Cesar, Spencer, Peters, Jason M., Hearne, Cameron C., Kumar, Parth, Todor, Horia, Huang, Kerwyn Casey, Gross, Carol A.
Publicado 2021

A tool-kit for high-throughput, quantitative analyses of genetic interactions in E. coli

por Typas, Athanasios, Nichols, Robert J., Siegele, Deborah A., Shales, Michael, Collins, Sean, Lim, Bentley, Braberg, Hannes, Yamamoto, Natsuko, Takeuchi, Rikiya, Wanner, Barry L., Mori, Hirotada, Weissman, Jonathan S., Krogan, Nevan J., Gross, Carol A.
Publicado 2008