Unbiased Estimate of Synonymous and Nonsynonymous Substitution Rates with Nonstationary Base Composition

por Guéguen, Laurent, Duret, Laurent
Publicado 2018

Accounting for horizontal gene transfers explains conflicting hypotheses regarding the position of aquificales in the phylogeny of Bacteria

por Boussau, Bastien, Guéguen, Laurent, Gouy, Manolo
Publicado 2008

A Mixture Model and a Hidden Markov Model to Simultaneously Detect Recombination Breakpoints and Reconstruct Phylogenies

por Boussau, Bastien, Guéguen, Laurent, Gouy, Manolo
Publicado 2009

Moments of genome evolution by Double Cut-and-Join

por Biller, Priscila, Guéguen, Laurent, Tannier, Eric
Publicado 2015

Probabilistic modeling of the evolution of gene synteny within reconciled phylogenies

por Semeria, Magali, Tannier, Eric, Guéguen, Laurent
Publicado 2015

Breaking Good: Accounting for Fragility of Genomic Regions in Rearrangement Distance Estimation

por Biller, Priscila, Guéguen, Laurent, Knibbe, Carole, Tannier, Eric
Publicado 2016

Accurate Detection of Convergent Amino-Acid Evolution with PCOC

por Rey, Carine, Guéguen, Laurent, Sémon, Marie, Boussau, Bastien
Publicado 2018

SENCA: A Multilayered Codon Model to Study the Origins and Dynamics of Codon Usage

por Pouyet, Fanny, Bailly-Bechet, Marc, Mouchiroud, Dominique, Guéguen, Laurent
Publicado 2016

MareyMap Online: A User-Friendly Web Application and Database Service for Estimating Recombination Rates Using Physical and Genetic Maps

por Siberchicot, Aurélie, Bessy, Adrien, Guéguen, Laurent, Marais, Gabriel AB
Publicado 2017

GC-biased gene conversion conceals the prediction of the nearly neutral theory in avian genomes

por Bolívar, Paulina, Guéguen, Laurent, Duret, Laurent, Ellegren, Hans, Mugal, Carina F.
Publicado 2019

Transcriptomic signatures shaped by cell proportions shed light on comparative developmental biology

por Pantalacci, Sophie, Guéguen, Laurent, Petit, Coraline, Lambert, Anne, Peterkovà, Renata, Sémon, Marie
Publicado 2017

DGINN, an automated and highly-flexible pipeline for the detection of genetic innovations on protein-coding genes

por Picard, Lea, Ganivet, Quentin, Allatif, Omran, Cimarelli, Andrea, Guéguen, Laurent, Etienne, Lucie
Publicado 2020

Detecting adaptive convergent amino acid evolution

por Rey, Carine, Lanore, Vincent, Veber, Philippe, Guéguen, Laurent, Lartillot, Nicolas, Sémon, Marie, Boussau, Bastien
Publicado 2019

Horizontal Gene Transfer Regulation in Bacteria as a “Spandrel” of DNA Repair Mechanisms

por Fall, Saliou, Mercier, Anne, Bertolla, Franck, Calteau, Alexandra, Gueguen, Laurent, Perrière, Guy, Vogel, Timothy M., Simonet, Pascal
Publicado 2007

Efficient Gene Tree Correction Guided by Genome Evolution

por Noutahi, Emmanuel, Semeria, Magali, Lafond, Manuel, Seguin, Jonathan, Boussau, Bastien, Guéguen, Laurent, El-Mabrouk, Nadia, Tannier, Eric
Publicado 2016

Distinct evolutionary trajectories of SARS-CoV-2-interacting proteins in bats and primates identify important host determinants of COVID-19

por Cariou, Marie, Picard, Léa, Guéguen, Laurent, Jacquet, Stéphanie, Cimarelli, Andrea, Fregoso, Oliver I., Molaro, Antoine, Navratil, Vincent, Etienne, Lucie
Publicado 2022

Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium

por Lassalle, Florent, Planel, Rémi, Penel, Simon, Chapulliot, David, Barbe, Valérie, Dubost, Audrey, Calteau, Alexandra, Vallenet, David, Mornico, Damien, Bigot, Thomas, Guéguen, Laurent, Vial, Ludovic, Muller, Daniel, Daubin, Vincent, Nesme, Xavier
Publicado 2017

Genomic Species Are Ecological Species as Revealed by Comparative Genomics in Agrobacterium tumefaciens

por Lassalle, Florent, Campillo, Tony, Vial, Ludovic, Baude, Jessica, Costechareyre, Denis, Chapulliot, David, Shams, Malek, Abrouk, Danis, Lavire, Céline, Oger-Desfeux, Christine, Hommais, Florence, Guéguen, Laurent, Daubin, Vincent, Muller, Daniel, Nesme, Xavier
Publicado 2011

Less effective selection leads to larger genomes

por Lefébure, Tristan, Morvan, Claire, Malard, Florian, François, Clémentine, Konecny-Dupré, Lara, Guéguen, Laurent, Weiss-Gayet, Michèle, Seguin-Orlando, Andaine, Ermini, Luca, Sarkissian, Clio Der, Charrier, N. Pierre, Eme, David, Mermillod-Blondin, Florian, Duret, Laurent, Vieira, Cristina, Orlando, Ludovic, Douady, Christophe Jean
Publicado 2017