An efficient algorithm for improving structure-based prediction of transcription factor binding sites

por Farrel, Alvin, Guo, Jun-tao
Publicado 2017

New insights into protein–DNA binding specificity from hydrogen bond based comparative study

por Lin, Maoxuan, Guo, Jun-tao
Publicado 2019

Comparative assessments of indel annotations in healthy and cancer genomes with next-generation sequencing data

por Chen, Jing, Guo, Jun-tao
Publicado 2020

Structural and functional analysis of somatic coding and UTR indels in breast and lung cancer genomes

por Chen, Jing, Guo, Jun-tao
Publicado 2021

Single-Stranded DNA Binding Proteins and Their Identification Using Machine Learning-Based Approaches

por Guo, Jun-Tao, Malik, Fareeha
Publicado 2022

PDA: an automatic and comprehensive analysis program for protein-DNA complex structures

por Kim, RyangGuk, Guo, Jun-tao
Publicado 2009

Systematic analysis of short internal indels and their impact on protein folding

por Kim, RyangGuk, Guo, Jun-tao
Publicado 2010

Insights into protein–DNA interactions from hydrogen bond energy‐based comparative protein–ligand analyses

por Malik, Fareeha K., Guo, Jun‐tao
Publicado 2022

Structure-based prediction of transcription factor binding specificity using an integrative energy function

por Farrel, Alvin, Murphy, Jonathan, Guo, Jun-tao
Publicado 2016

Structural analysis of heme proteins: implications for design and prediction

por Li, Ting, Bonkovsky, Herbert L, Guo, Jun-tao
Publicado 2011

TFinDit: transcription factor-DNA interaction data depository

por Turner, Daniel, Kim, RyangGuk, Guo, Jun-tao
Publicado 2012

A comparative study of protein–ssDNA interactions

por Lin, Maoxuan, Malik, Fareeha K, Guo, Jun-tao
Publicado 2021

High performance transcription factor-DNA docking with GPU computing

por Wu, Jiadong, Hong, Bo, Takeda, Takako, Guo, Jun-tao
Publicado 2012

An SVM-based method for assessment of transcription factor-DNA complex models

por Corona, Rosario I., Sudarshan, Sanjana, Aluru, Srinivas, Guo, Jun-tao
Publicado 2018

Benchmarks for flexible and rigid transcription factor-DNA docking

por Kim, RyangGuk, Corona, Rosario I, Hong, Bo, Guo, Jun-tao
Publicado 2011

Effects of short indels on protein structure and function in human genomes

por Lin, Maoxuan, Whitmire, Sarah, Chen, Jing, Farrel, Alvin, Shi, Xinghua, Guo, Jun-tao
Publicado 2017

Quantitative evaluation of protein–DNA interactions using an optimized knowledge-based potential

por Liu, Zhijie, Mao, Fenglou, Guo, Jun-tao, Yan, Bo, Wang, Peng, Qu, Youxing, Xu, Ying
Publicado 2005

Direct activation of human and mouse Oct4 genes using engineered TALE and Cas9 transcription factors

por Hu, Jiabiao, Lei, Yong, Wong, Wing-Ki, Liu, Senquan, Lee, Kai-Chuen, He, Xiangjun, You, Wenxing, Zhou, Rui, Guo, Jun-Tao, Chen, Xiongfong, Peng, Xianlu, Sun, Hao, Huang, He, Zhao, Hui, Feng, Bo
Publicado 2014