Characteristics of circulating small noncoding RNAs in plasma and serum during human aging

por Xiao, Ping, Shi, Zhangyue, Liu, Chenang, Hagen, Darren E.
Publicado 2023

RNA-seq reveals insights into molecular mechanisms of metabolic restoration via tryptophan supplementation in low birth weight piglet model

por Xiao, Ping, Goodarzi, Parniyan, Pezeshki, Adel, Hagen, Darren E
Publicado 2022

Characterization of tRNA expression profiles in large offspring syndrome

por Goldkamp, Anna K., Li, Yahan, Rivera, Rocio M., Hagen, Darren E.
Publicado 2022

Differentially expressed tRNA-derived fragments in bovine fetuses with assisted reproduction induced congenital overgrowth syndrome

por Goldkamp, Anna K., Li, Yahan, Rivera, Rocio M., Hagen, Darren E.
Publicado 2022

Influence of Maternal BLV Infection on miRNA and tRF Expression in Calves

por Goldkamp, Anna K., Lahuis, Ciarra H., Hagen, Darren E., Taxis, Tasia M.
Publicado 2023

Global misregulation of genes largely uncoupled to DNA methylome epimutations characterizes a congenital overgrowth syndrome

por Chen, Zhiyuan, Hagen, Darren E., Ji, Tieming, Elsik, Christine G., Rivera, Rocío M.
Publicado 2017

Allele-specific aberration of imprinted domain chromosome architecture associates with large offspring syndrome

por Li, Yahan, Boadu, Frimpong, Highsmith, Max R., Hagen, Darren E., Cheng, Jianlin, Rivera, Rocío Melissa
Publicado 2022

Bovine Genome Database: new tools for gleaning function from the Bos taurus genome

por Elsik, Christine G., Unni, Deepak R., Diesh, Colin M., Tayal, Aditi, Emery, Marianne L., Nguyen, Hung N., Hagen, Darren E.
Publicado 2016

Hymenoptera Genome Database: integrating genome annotations in HymenopteraMine

por Elsik, Christine G., Tayal, Aditi, Diesh, Colin M., Unni, Deepak R., Emery, Marianne L., Nguyen, Hung N., Hagen, Darren E.
Publicado 2016

Global assessment of imprinted gene expression in the bovine conceptus by next generation sequencing

por Chen, Zhiyuan, Hagen, Darren E., Wang, Juanbin, Elsik, Christine G., Ji, Tieming, Siqueira, Luiz G., Hansen, Peter J., Rivera, Rocío M.
Publicado 2016

Effect of food source availability in the salivary gland transcriptome of the unique burying beetle Nicrophorus pustulatus (Coleoptera: Silphidae)

por Ayala-Ortiz, Christian O., Farriester, Jacob W., Pratt, Carrie J., Goldkamp, Anna K., Matts, Jessica, Hoback, W. Wyatt, Gustafson, John E., Hagen, Darren E.
Publicado 2021

Bovine Genome Database: new annotation tools for a new reference genome

por Shamimuzzaman, Md, Le Tourneau, Justin J, Unni, Deepak R, Diesh, Colin M, Triant, Deborah A, Walsh, Amy T, Tayal, Aditi, Conant, Gavin C, Hagen, Darren E, Elsik, Christine G
Publicado 2020

SARS CoV-2 (Delta Variant) Infection Kinetics and Immunopathogenesis in Domestic Cats

por Tamil Selvan, Miruthula, Gunasekara, Sachithra, Xiao, Ping, Griffin, Kristen, Cowan, Shannon R., Narayanan, Sai, Ramachandran, Akhilesh, Hagen, Darren E., Ritchey, Jerry W., Rudd, Jennifer M., Miller, Craig A.
Publicado 2022

Bovine Genome Database: integrated tools for genome annotation and discovery

por Childers, Christopher P., Reese, Justin T., Sundaram, Jaideep P., Vile, Donald C., Dickens, C. Michael, Childs, Kevin L., Salih, Hanni, Bennett, Anna K., Hagen, Darren E., Adelson, David L., Elsik, Christine G.
Publicado 2011

AgAnimalGenomes: browsers for viewing and manually annotating farm animal genomes

por Triant, Deborah A., Walsh, Amy T., Hartley, Gabrielle A., Petry, Bruna, Stegemiller, Morgan R., Nelson, Benjamin M., McKendrick, Makenna M., Fuller, Emily P., Cockett, Noelle E., Koltes, James E., McKay, Stephanie D., Green, Jonathan A., Murdoch, Brenda M., Hagen, Darren E., Elsik, Christine G.
Publicado 2023

The genomic basis of evolutionary differentiation among honey bees

por Fouks, Bertrand, Brand, Philipp, Nguyen, Hung N., Herman, Jacob, Camara, Francisco, Ence, Daniel, Hagen, Darren E., Hoff, Katharina J., Nachweide, Stefanie, Romoth, Lars, Walden, Kimberly K.O., Guigo, Roderic, Stanke, Mario, Narzisi, Giuseppe, Yandell, Mark, Robertson, Hugh M., Koeniger, Nikolaus, Chantawannakul, Panuwan, Schatz, Michael C., Worley, Kim C., Robinson, Gene E., Elsik, Christine G., Rueppell, Olav
Publicado 2021

De novo assembly of the cattle reference genome with single-molecule sequencing

por Rosen, Benjamin D, Bickhart, Derek M, Schnabel, Robert D, Koren, Sergey, Elsik, Christine G, Tseng, Elizabeth, Rowan, Troy N, Low, Wai Y, Zimin, Aleksey, Couldrey, Christine, Hall, Richard, Li, Wenli, Rhie, Arang, Ghurye, Jay, McKay, Stephanie D, Thibaud-Nissen, Françoise, Hoffman, Jinna, Murdoch, Brenda M, Snelling, Warren M, McDaneld, Tara G, Hammond, John A, Schwartz, John C, Nandolo, Wilson, Hagen, Darren E, Dreischer, Christian, Schultheiss, Sebastian J, Schroeder, Steven G, Phillippy, Adam M, Cole, John B, Van Tassell, Curtis P, Liu, George, Smith, Timothy P L, Medrano, Juan F
Publicado 2020

Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality

por Simola, Daniel F., Wissler, Lothar, Donahue, Greg, Waterhouse, Robert M., Helmkampf, Martin, Roux, Julien, Nygaard, Sanne, Glastad, Karl M., Hagen, Darren E., Viljakainen, Lumi, Reese, Justin T., Hunt, Brendan G., Graur, Dan, Elhaik, Eran, Kriventseva, Evgenia V., Wen, Jiayu, Parker, Brian J., Cash, Elizabeth, Privman, Eyal, Childers, Christopher P., Muñoz-Torres, Monica C., Boomsma, Jacobus J., Bornberg-Bauer, Erich, Currie, Cameron R., Elsik, Christine G., Suen, Garret, Goodisman, Michael A.D., Keller, Laurent, Liebig, Jürgen, Rawls, Alan, Reinberg, Danny, Smith, Chris D., Smith, Chris R., Tsutsui, Neil, Wurm, Yannick, Zdobnov, Evgeny M., Berger, Shelley L., Gadau, Jürgen
Publicado 2013

The Genome Sequence of the Leaf-Cutter Ant Atta cephalotes Reveals Insights into Its Obligate Symbiotic Lifestyle

por Suen, Garret, Teiling, Clotilde, Li, Lewyn, Holt, Carson, Abouheif, Ehab, Bornberg-Bauer, Erich, Bouffard, Pascal, Caldera, Eric J., Cash, Elizabeth, Cavanaugh, Amy, Denas, Olgert, Elhaik, Eran, Favé, Marie-Julie, Gadau, Jürgen, Gibson, Joshua D., Graur, Dan, Grubbs, Kirk J., Hagen, Darren E., Harkins, Timothy T., Helmkampf, Martin, Hu, Hao, Johnson, Brian R., Kim, Jay, Marsh, Sarah E., Moeller, Joseph A., Muñoz-Torres, Mónica C., Murphy, Marguerite C., Naughton, Meredith C., Nigam, Surabhi, Overson, Rick, Rajakumar, Rajendhran, Reese, Justin T., Scott, Jarrod J., Smith, Chris R., Tao, Shu, Tsutsui, Neil D., Viljakainen, Lumi, Wissler, Lothar, Yandell, Mark D., Zimmer, Fabian, Taylor, James, Slater, Steven C., Clifton, Sandra W., Warren, Wesley C., Elsik, Christine G., Smith, Christopher D., Weinstock, George M., Gerardo, Nicole M., Currie, Cameron R.
Publicado 2011