Chromatin remodeling in bovine embryos indicates species-specific regulation of genome activation

por Halstead, Michelle M., Ma, Xin, Zhou, Chuan, Schultz, Richard M., Ross, Pablo J.
Publicado 2020

Transcription initiation mapping in 31 bovine tissues reveals complex promoter activity, pervasive transcription, and tissue-specific promoter usage

por Goszczynski, Daniel E., Halstead, Michelle M., Islas-Trejo, Alma D., Zhou, Huaijun, Ross, Pablo J.
Publicado 2021

Large-Scale Multiplexing Permits Full-Length Transcriptome Annotation of 32 Bovine Tissues From a Single Nanopore Flow Cell

por Halstead, Michelle M., Islas-Trejo, Alma, Goszczynski, Daniel E., Medrano, Juan F., Zhou, Huaijun, Ross, Pablo J.
Publicado 2021

Simplification of culture conditions and feeder-free expansion of bovine embryonic stem cells

por Soto, Delia Alba, Navarro, Micaela, Zheng, Canbin, Halstead, Michelle Margaret, Zhou, Chuan, Guiltinan, Carly, Wu, Jun, Ross, Pablo Juan
Publicado 2021

Prediction of transcript isoforms in 19 chicken tissues by Oxford Nanopore long-read sequencing

por Guan, Dailu, Halstead, Michelle M., Islas-Trejo, Alma D., Goszczynski, Daniel E., Cheng, Hans H., Ross, Pablo J., Zhou, Huaijun
Publicado 2022

Salmonella enterica Serovars Enteritidis Infection Alters the Indigenous Microbiota Diversity in Young Layer Chicks

por Mon, Khin K. Z., Saelao, Perot, Halstead, Michelle M., Chanthavixay, Ganrea, Chang, Huai-Chen, Garas, Lydia, Maga, Elizabeth A., Zhou, Huaijun
Publicado 2015

Profiling of open chromatin in developing pig (Sus scrofa) muscle to identify regulatory regions

por Salavati, Mazdak, Woolley, Shernae A, Cortés Araya, Yennifer, Halstead, Michelle M, Stenhouse, Claire, Johnsson, Martin, Ashworth, Cheryl J, Archibald, Alan L, Donadeu, Francesc X, Hassan, Musa A, Clark, Emily L
Publicado 2021

A comparative analysis of chromatin accessibility in cattle, pig, and mouse tissues

por Halstead, Michelle M., Kern, Colin, Saelao, Perot, Wang, Ying, Chanthavixay, Ganrea, Medrano, Juan F., Van Eenennaam, Alison L., Korf, Ian, Tuggle, Christopher K., Ernst, Catherine W., Zhou, Huaijun, Ross, Pablo J.
Publicado 2020

Pig genome functional annotation enhances the biological interpretation of complex traits and human disease

por Pan, Zhangyuan, Yao, Yuelin, Yin, Hongwei, Cai, Zexi, Wang, Ying, Bai, Lijing, Kern, Colin, Halstead, Michelle, Chanthavixay, Ganrea, Trakooljul, Nares, Wimmers, Klaus, Sahana, Goutam, Su, Guosheng, Lund, Mogens Sandø, Fredholm, Merete, Karlskov-Mortensen, Peter, Ernst, Catherine W., Ross, Pablo, Tuggle, Christopher K., Fang, Lingzhao, Zhou, Huaijun
Publicado 2021

Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research

por Kern, Colin, Wang, Ying, Xu, Xiaoqin, Pan, Zhangyuan, Halstead, Michelle, Chanthavixay, Ganrea, Saelao, Perot, Waters, Susan, Xiang, Ruidong, Chamberlain, Amanda, Korf, Ian, Delany, Mary E., Cheng, Hans H., Medrano, Juan F., Van Eenennaam, Alison L., Tuggle, Chris K., Ernst, Catherine, Flicek, Paul, Quon, Gerald, Ross, Pablo, Zhou, Huaijun
Publicado 2021

An atlas of regulatory elements in chicken: A resource for chicken genetics and genomics

por Pan, Zhangyuan, Wang, Ying, Wang, Mingshan, Wang, Yuzhe, Zhu, Xiaoning, Gu, Shenwen, Zhong, Conghao, An, Liqi, Shan, Mingzhu, Damas, Joana, Halstead, Michelle M., Guan, Dailu, Trakooljul, Nares, Wimmers, Klaus, Bi, Ye, Wu, Shang, Delany, Mary E., Bai, Xuechen, Cheng, Hans H., Sun, Congjiao, Yang, Ning, Hu, Xiaoxiang, Lewin, Harris A., Fang, Lingzhao, Zhou, Huaijun
Publicado 2023