Learning what not to select for in antibody drug discovery

por Gao, Beichen, Han, Jiami, Reddy, Sai T.
Publicado 2022

Simvastatin functions as a heat shock protein 90 inhibitor against triple‐negative breast cancer

por Kou, Xinhui, Jiang, Xiaoxiao, Liu, Huijuan, Wang, Xuan, Sun, Fanghui, Han, Jiami, Fan, Jiaxing, Feng, Guize, Lin, Zhaohu, Jiang, Lan, Yang, Yonghua
Publicado 2018

TLR7 Signaling Shapes and Maintains Antibody Diversity Upon Virus-Like Particle Immunization

por Chang, Xinyue, Krenger, Pascal, Krueger, Caroline C., Zha, Lisha, Han, Jiami, Yermanos, Alexander, Roongta, Salony, Mohsen, Mona O., Oxenius, Annette, Vogel, Monique, Bachmann, Martin F.
Publicado 2022

Deep mutational learning predicts ACE2 binding and antibody escape to combinatorial mutations in the SARS-CoV-2 receptor-binding domain

por Taft, Joseph M., Weber, Cédric R., Gao, Beichen, Ehling, Roy A., Han, Jiami, Frei, Lester, Metcalfe, Sean W., Overath, Max D., Yermanos, Alexander, Kelton, William, Reddy, Sai T.
Publicado 2022

Echidna: integrated simulations of single-cell immune receptor repertoires and transcriptomes

por Han, Jiami, Masserey, Solène, Shlesinger, Danielle, Kuhn, Raphael, Papadopoulou, Chrysa, Agrafiotis, Andreas, Kreiner, Victor, Dizerens, Raphael, Hong, Kai-Lin, Weber, Cédric, Greiff, Victor, Oxenius, Annette, Reddy, Sai T, Yermanos, Alexander
Publicado 2022

Platypus: an open-access software for integrating lymphocyte single-cell immune repertoires with transcriptomes

por Yermanos, Alexander, Agrafiotis, Andreas, Kuhn, Raphael, Robbiani, Damiano, Yates, Josephine, Papadopoulou, Chrysa, Han, Jiami, Sandu, Ioana, Weber, Cédric, Bieberich, Florian, Vazquez-Lombardi, Rodrigo, Dounas, Andreas, Neumeier, Daniel, Oxenius, Annette, Reddy, Sai T
Publicado 2021

Profiling the specificity of clonally expanded plasma cells during chronic viral infection by single‐cell analysis

por Neumeier, Daniel, Pedrioli, Alessandro, Genovese, Alessandro, Sandu, Ioana, Ehling, Roy, Hong, Kai‐Lin, Papadopoulou, Chrysa, Agrafiotis, Andreas, Kuhn, Raphael, Shlesinger, Danielle, Robbiani, Damiano, Han, Jiami, Hauri, Laura, Csepregi, Lucia, Greiff, Victor, Merkler, Doron, Reddy, Sai T., Oxenius, Annette, Yermanos, Alexander
Publicado 2021

DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2

por Yermanos, Alexander, Hong, Kai-Lin, Agrafiotis, Andreas, Han, Jiami, Nadeau, Sarah, Valenzuela, Cecilia, Azizoglu, Asli, Ehling, Roy, Gao, Beichen, Spahr, Michael, Neumeier, Daniel, Chang, Ching-Hsiang, Dounas, Andreas, Petrillo, Ezequiel, Nissen, Ina, Burcklen, Elodie, Feldkamp, Mirjam, Beisel, Christian, Oxenius, Annette, Savic, Miodrag, Stadler, Tanja, Rudolf, Fabian, Reddy, Sai T.
Publicado 2022

ePlatypus: an ecosystem for computational analysis of immunogenomics data

por Cotet, Tudor-Stefan, Agrafiotis, Andreas, Kreiner, Victor, Kuhn, Raphael, Shlesinger, Danielle, Manero-Carranza, Marcos, Khodaverdi, Keywan, Kladis, Evgenios, Desideri Perea, Aurora, Maassen-Veeters, Dylan, Glänzer, Wiona, Massery, Solène, Guerci, Lorenzo, Hong, Kai-Lin, Han, Jiami, Stiklioraitis, Kostas, D’Arcy, Vittoria Martinolli, Dizerens, Raphael, Kilchenmann, Samuel, Stalder, Lucas, Nissen, Leon, Vogelsanger, Basil, Anzböck, Stine, Laslo, Daria, Bakker, Sophie, Kondorosy, Melinda, Venerito, Marco, Sanz García, Alejandro, Feller, Isabelle, Oxenius, Annette, Reddy, Sai T, Yermanos, Alexander
Publicado 2023