The virome: a missing component of biological interaction networks in health and disease

por Handley, Scott A.
Publicado 2016

Going Viral: a Novel Role for Bacteriophage in Colorectal Cancer

por Handley, Scott A., Devkota, Suzanne
Publicado 2019

Phages and Human Health: More Than Idle Hitchhikers

por Lawrence, Dylan, Baldridge, Megan T., Handley, Scott A.
Publicado 2019

The dark side of the gut: Virome–host interactions in intestinal homeostasis and disease

por Li, Yuhao, Handley, Scott A., Baldridge, Megan T.
Publicado 2021

Kingdom-Agnostic Metagenomics and the Importance of Complete Characterization of Enteric Microbial Communities

por Norman, Jason M., Handley, Scott A., Virgin, Herbert W.
Publicado 2014

Tracking the prevalence and emergence of SARS CoV2 variants of concern using a regional genomic surveillance program

por Jung, Ana, Droit, Lindsay, Febles, Binita, Fronick, Catarina, Cook, Lisa, Handley, Scott A., Parikh, Bijal A, Wang, David
Publicado 2023

Growth velocity in children with Environmental Enteric Dysfunction is associated with specific bacterial and viral taxa of the gastrointestinal tract in Malawian children

por Desai, Chandni, Handley, Scott A., Rodgers, Rachel, Rodriguez, Cynthia, Ordiz, Maria I., Manary, Mark J., Holtz, Lori R.
Publicado 2020

Divergent Enteroviruses from Macaques with Chronic Diarrhea

por Mihindukulasuriya, Kathie A., Droit, Lindsay, Gilbert, Margaret H., Didier, Peter J., Paredes, Anne, Handley, Scott A., Bohm, Rudolf P., Wang, David
Publicado 2021

Enteric virome negatively affects seroconversion following oral rotavirus vaccination in a longitudinally sampled cohort of Ghanaian infants

por Kim, Andrew HyoungJin, Armah, George, Dennis, Francis, Wang, Leran, Rodgers, Rachel, Droit, Lindsay, Baldridge, Megan T., Handley, Scott A., Harris, Vanessa C.
Publicado 2022

Discordant transmission of bacteria and viruses from mothers to babies at birth

por Maqsood, Rabia, Rodgers, Rachel, Rodriguez, Cynthia, Handley, Scott A., Ndao, I. Malick, Tarr, Phillip I., Warner, Barbara B., Lim, Efrem S., Holtz, Lori R.
Publicado 2019

The history and organization of the Workshop on Population and Speciation Genomics

por Barth, Julia M. I., Handley, Scott A., Kintzl, Daniel, Leonard, Guy, Malinsky, Milan, Matschiner, Michael, Meyer, Britta S., Salzburger, Walter, Stefka, Jan, Trucchi, Emiliano
Publicado 2023

A Mouse Model for Human Norovirus

por Taube, Stefan, Kolawole, Abimbola O., Höhne, Marina, Wilkinson, John E., Handley, Scott A., Perry, Jeffrey W., Thackray, Larissa B., Akkina, Ramesh, Wobus, Christiane E.
Publicado 2013

Single-cell genomics for resolution of conserved bacterial genes and mobile genetic elements of the human intestinal microbiota using flow cytometry

por Lawrence, Dylan, Campbell, Danielle E., Schriefer, Lawrence A., Rodgers, Rachel, Walker, Forrest C., Turkin, Marissa, Droit, Lindsay, Parkes, Miles, Handley, Scott A., Baldridge, Megan T.
Publicado 2022

Ten simple rules and a template for creating workflows-as-applications

por Roach, Michael J., Pierce-Ward, N. Tessa, Suchecki, Radoslaw, Mallawaarachchi, Vijini, Papudeshi, Bhavya, Handley, Scott A., Brown, C. Titus, Watson-Haigh, Nathan S., Edwards, Robert A.
Publicado 2022

Oral Antibiotic Treatment of Mice Exacerbates the Disease Severity of Multiple Flavivirus Infections

por Thackray, Larissa B., Handley, Scott A., Gorman, Matthew J., Poddar, Subhajit, Bagadia, Prachi, Briseño, Carlos G., Theisen, Derek J., Tan, Qing, Hykes, Barry L., Lin, Hueylie, Lucas, Tiffany M., Desai, Chandni, Gordon, Jeffrey I., Murphy, Kenneth M., Virgin, Herbert W., Diamond, Michael S.
Publicado 2018

Neutralizing antibodies protect mice against Venezuelan equine encephalitis virus aerosol challenge

por Kafai, Natasha M., Williamson, Lauren E., Binshtein, Elad, Sukupolvi-Petty, Soila, Gardner, Christina L., Liu, Jaclyn, Mackin, Samantha, Kim, Arthur S., Kose, Nurgun, Carnahan, Robert H., Jung, Ana, Droit, Lindsay, Reed, Douglas S., Handley, Scott A., Klimstra, William B., Crowe, James E., Diamond, Michael S.
Publicado 2022

The highly conserved stem-loop II motif is dispensable for SARS-CoV-2

por Jiang, Hongbing, Joshi, Astha, Gan, Tianyu, Janowski, Andrew B, Fujii, Chika, Bricker, Traci L, Darling, Tamarand L, Harastani, Houda H., Seehra, Kuljeet, Chen, Hongwei, Tahan, Stephen, Jung, Ana, Febles, Binita, Blatter, Joshua A, Handley, Scott A, Parikh, Bijal A, Wang, David, Boon, Adrianus CM
Publicado 2023

The Highly Conserved Stem-Loop II Motif Is Dispensable for SARS-CoV-2

por Jiang, Hongbing, Joshi, Astha, Gan, Tianyu, Janowski, Andrew B., Fujii, Chika, Bricker, Traci L., Darling, Tamarand L., Harastani, Houda H., Seehra, Kuljeet, Chen, Hongwei, Tahan, Stephen, Jung, Ana, Febles, Binita, Blatter, Joshua A., Handley, Scott A., Parikh, Bijal A., Wang, David, Boon, Adrianus C. M.
Publicado 2023

Autophagy Genes Enhance Murine Gammaherpesvirus 68 Reactivation from Latency by Preventing Virus-Induced Systemic Inflammation

por Park, Sunmin, Buck, Michael D., Desai, Chandni, Zhang, Xin, Loginicheva, Ekaterina, Martinez, Jennifer, Freeman, Michael L., Saitoh, Tatsuya, Akira, Shizuo, Guan, Jun-Lin, He, You-Wen, Blackman, Marcia A., Handley, Scott A., Levine, Beth, Green, Douglas R., Reese, Tiffany A., Artyomov, Maxim N., Virgin, Herbert W.
Publicado 2016

Broadly neutralizing monoclonal antibodies protect against multiple tick-borne flaviviruses

por VanBlargan, Laura A., Errico, John M., Kafai, Natasha M., Burgomaster, Katherine E., Jethva, Prashant N., Broeckel, Rebecca M., Meade-White, Kimberly, Nelson, Christopher A., Himansu, Sunny, Wang, David, Handley, Scott A., Gross, Michael L., Best, Sonja M., Pierson, Theodore C., Fremont, Daved H., Diamond, Michael S.
Publicado 2021