Theoretical analyses on a flipping mechanism of UV-induced DNA damage

por Sato, Ryuma, Harada, Ryuhei, Shigeta, Yasuteru
Publicado 2016

The binding structure and affinity of photodamaged duplex DNA with members of the photolyase/cryptochrome family: A computational study

por Sato, Ryuma, Harada, Ryuhei, Shigeta, Yasuteru
Publicado 2018

Residue Folding Degree—Relationship to Secondary Structure Categories and Use as Collective Variable

por Sladek, Vladimir, Harada, Ryuhei, Shigeta, Yasuteru
Publicado 2021

Ligand Binding Path Sampling Based on Parallel Cascade Selection Molecular Dynamics: LB-PaCS-MD

por Aida, Hayato, Shigeta, Yasuteru, Harada, Ryuhei
Publicado 2022

pyProGA—A PyMOL plugin for protein residue network analysis

por Sladek, Vladimir, Yamamoto, Yuta, Harada, Ryuhei, Shoji, Mitsuo, Shigeta, Yasuteru, Sladek, Vladimir
Publicado 2021

Biomolecular interactions modulate macromolecular structure and dynamics in atomistic model of a bacterial cytoplasm

por Yu, Isseki, Mori, Takaharu, Ando, Tadashi, Harada, Ryuhei, Jung, Jaewoon, Sugita, Yuji, Feig, Michael
Publicado 2016

Case Report: Guitarist’s cramp as the initial manifestation of dopa-responsive dystonia with a novel heterozygous GCH1 mutation

por Hasegawa, Takafumi, Hosaka, Tatsuhiko, Harada, Ryuhei, Kawahata, Ichiro, Hoshino, Kyoko, Sugeno, Naoto, Kikuchi, Akio, Aoki, Masashi
Publicado 2021

Autism-associated mutation in Hevin/Sparcl1 induces endoplasmic reticulum stress through structural instability

por Taketomi, Takumi, Yasuda, Takunori, Morita, Rikuri, Kim, Jaehyun, Shigeta, Yasuteru, Eroglu, Cagla, Harada, Ryuhei, Tsuruta, Fuminori
Publicado 2022

Peculiar Unpleasant Dysgeusia as the Sole Initial Symptom of Guillain-Barré Syndrome

por Nakamura, Takaaki, Tsukita, Kenichi, Suzuki, Asako, Watanabe, Genya, Harada, Ryuhei, Kawasaki, Emiko, Chiba, Tetsuya, Sugaya, Ryo, Suzuki, Yasushi
Publicado 2019

Sporadic Inclusion Body Myositis Manifesting as Isolated Muscle Weakness of the Finger Flexors Three Years after Disease Onset

por Suwa, Yuichi, Suzuki, Naoki, Soga, Temma, Harada, Ryuhei, Shibui, Aya, Kuroda, Hiroshi, Izumi, Rumiko, Tateyama, Maki, Nakashima, Ichiro, Sonoo, Masahiro, Aoki, Masashi
Publicado 2016

Design of electron-donating group substituted 2-PAM analogs as antidotes for organophosphate insecticide poisoning

por Kongkaew, Nalinee, Hengphasatporn, Kowit, Injongkol, Yuwanda, Mee-udorn, Pitchayathida, Shi, Liyi, Mahalapbutr, Panupong, Maitarad, Phornphimon, Harada, Ryuhei, Shigeta, Yasuteru, Rungrotmongkol, Thanyada, Vangnai, Alisa S.
Publicado 2023

Coulomb and CH–π interactions in (6–4) photolyase–DNA complex dominate DNA binding and repair abilities

por Terai, Yuma, Sato, Ryuma, Yumiba, Takahiro, Harada, Ryuhei, Shimizu, Kohei, Toga, Tatsuya, Ishikawa-Fujiwara, Tomoko, Todo, Takeshi, Iwai, Shigenori, Shigeta, Yasuteru, Yamamoto, Junpei
Publicado 2018

Promising SARS-CoV-2 main protease inhibitor ligand-binding modes evaluated using LB-PaCS-MD/FMO

por Hengphasatporn, Kowit, Harada, Ryuhei, Wilasluck, Patcharin, Deetanya, Peerapon, Sukandar, Edwin R., Chavasiri, Warinthorn, Suroengrit, Aphinya, Boonyasuppayakorn, Siwaporn, Rungrotmongkol, Thanyada, Wangkanont, Kittikhun, Shigeta, Yasuteru
Publicado 2022

Molecular mechanisms of substrate specificities of uridinecytidine kinase

por Tanaka, Wataru, Shoji, Mitsuo, Tomoike, Fumiaki, Ujiie, Yuzuru, Hanaoka, Kyohei, Harada, Ryuhei, Kayanuma, Megumi, Kamiya, Katsumasa, Ishida, Toyokazu, Masui, Ryoji, Kuramitsu, Seiki, Shigeta, Yasuteru
Publicado 2016

Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases

por Nishida, Yuya, Yanagisawa, Sachiko, Morita, Rikuri, Shigematsu, Hideki, Shinzawa-Itoh, Kyoko, Yuki, Hitomi, Ogasawara, Satoshi, Shimuta, Ken, Iwamoto, Takashi, Nakabayashi, Chisa, Matsumura, Waka, Kato, Hisakazu, Gopalasingam, Chai, Nagao, Takemasa, Qaqorh, Tasneem, Takahashi, Yusuke, Yamazaki, Satoru, Kamiya, Katsumasa, Harada, Ryuhei, Mizuno, Nobuhiro, Takahashi, Hideyuki, Akeda, Yukihiro, Ohnishi, Makoto, Ishii, Yoshikazu, Kumasaka, Takashi, Murata, Takeshi, Muramoto, Kazumasa, Tosha, Takehiko, Shiro, Yoshitsugu, Honma, Teruki, Shigeta, Yasuteru, Kubo, Minoru, Takashima, Seiji, Shintani, Yasunori
Publicado 2022

Author Correction: Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases

por Nishida, Yuya, Yanagisawa, Sachiko, Morita, Rikuri, Shigematsu, Hideki, Shinzawa-Itoh, Kyoko, Yuki, Hitomi, Ogasawara, Satoshi, Shimuta, Ken, Iwamoto, Takashi, Nakabayashi, Chisa, Matsumura, Waka, Kato, Hisakazu, Gopalasingam, Chai, Nagao, Takemasa, Qaqorh, Tasneem, Takahashi, Yusuke, Yamazaki, Satoru, Kamiya, Katsumasa, Harada, Ryuhei, Mizuno, Nobuhiro, Takahashi, Hideyuki, Akeda, Yukihiro, Ohnishi, Makoto, Ishii, Yoshikazu, Kumasaka, Takashi, Murata, Takeshi, Muramoto, Kazumasa, Tosha, Takehiko, Shiro, Yoshitsugu, Honma, Teruki, Shigeta, Yasuteru, Kubo, Minoru, Takashima, Seiji, Shintani, Yasunori
Publicado 2022