Gene Set Summarization using Large Language Models

por Joachimiak, Marcin P., Caufield, J. Harry, Harris, Nomi L., Kim, Hyeongsik, Mungall, Christopher J.
Publicado 2023

BOSC 2022: the first hybrid and 23rd annual Bioinformatics Open Source Conference

por Harris, Nomi L., Hokamp, Karsten, Ménager, Hervé, Munoz-Torres, Monica, Unni, Deepak, Vasilevsky, Nicole, Williams, Jason
Publicado 2022

ROBOT: A Tool for Automating Ontology Workflows

por Jackson, Rebecca C., Balhoff, James P., Douglass, Eric, Harris, Nomi L., Mungall, Christopher J., Overton, James A.
Publicado 2019

The 2015 Bioinformatics Open Source Conference (BOSC 2015)

por Harris, Nomi L., Cock, Peter J. A., Lapp, Hilmar, Chapman, Brad, Davey, Rob, Fields, Christopher, Hokamp, Karsten, Munoz-Torres, Monica
Publicado 2016

The 2018 Bioinformatics Open Source Conference (GCCBOSC 2018)

por Harris, Nomi L., Wiencko, Heather, Chapman, Brad, Cock, Peter J.A., Hokamp, Karsten, Lapp, Hilmar, Fields, Chris, Greshake Tzovaras, Bastian
Publicado 2018

The 2016 Bioinformatics Open Source Conference (BOSC)

por Harris, Nomi L., Cock, Peter J.A., Chapman, Brad, Fields, Christopher J., Hokamp, Karsten, Lapp, Hilmar, Muñoz-Torres, Monica, Wiencko, Heather
Publicado 2016

The 21st annual Bioinformatics Open Source Conference (BOSC 2020, part of BCC2020)

por Harris, Nomi L., Cock, Peter J.A., Fields, Christopher J., Hokamp, Karsten, Maia, Jessica, Munoz-Torres, Monica, Taschuk, Morgan, Yehudi, Yo
Publicado 2020

BOSC 2021, the 22nd Annual Bioinformatics Open Source Conference

por Harris, Nomi L., Cock, Peter J. A., Fields, Christopher J., Hokamp, Karsten, Maia, Jessica, Munoz-Torres, Monica, Sharan, Malvika, Williams, Jason
Publicado 2021

The 2017 Bioinformatics Open Source Conference (BOSC)

por Harris, Nomi L., Cock, Peter J.A., Chapman, Brad, Fields, Christopher J., Hokamp, Karsten, Lapp, Hilmar, Munoz-Torres, Monica, Tzovaras, Bastian Greshake, Wiencko, Heather
Publicado 2017

Apollo: Democratizing genome annotation

por Dunn, Nathan A., Unni, Deepak R., Diesh, Colin, Munoz-Torres, Monica, Harris, Nomi L., Yao, Eric, Rasche, Helena, Holmes, Ian H., Elsik, Christine G., Lewis, Suzanna E.
Publicado 2019

BOSC 2019, the 20th annual Bioinformatics Open Source Conference

por Harris, Nomi L., Cock, Peter J.A., Fields, Christopher J., Greshake Tzovaras, Bastian, Heuer, Michael, Hokamp, Karsten, Munoz-Torres, Monica, Peltzer, Alexander, Rieck, Bastian, Wiencko, Heather, Yehudi, Yo
Publicado 2019

KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

por Reese, Justin, Unni, Deepak, Callahan, Tiffany J., Cappelletti, Luca, Ravanmehr, Vida, Carbon, Seth, Fontana, Tommaso, Blau, Hannah, Matentzoglu, Nicolas, Harris, Nomi L., Munoz-Torres, Monica C., Robinson, Peter N., Joachimiak, Marcin P., Mungall, Christopher J.
Publicado 2020

Metformin is associated with reduced COVID-19 severity in patients with prediabetes

por Chan, Lauren E., Casiraghi, Elena, Laraway, Bryan, Coleman, Ben, Blau, Hannah, Zaman, Adnin, Harris, Nomi L., Wilkins, Kenneth, Antony, Blessy, Gargano, Michael, Valentini, Giorgio, Sahner, David, Haendel, Melissa, Robinson, Peter N., Bramante, Carolyn, Reese, Justin
Publicado 2022

Phenopacket-tools: Building and validating GA4GH Phenopackets

por Danis, Daniel, Jacobsen, Julius O. B., Wagner, Alex H., Groza, Tudor, Beckwith, Martha A., Rekerle, Lauren, Carmody, Leigh C., Reese, Justin, Hegde, Harshad, Ladewig, Markus S., Seitz, Berthold, Munoz-Torres, Monica, Harris, Nomi L., Rambla, Jordi, Baudis, Michael, Mungall, Christopher J., Haendel, Melissa A., Robinson, Peter N.
Publicado 2023

KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response

por Reese, Justin T., Unni, Deepak, Callahan, Tiffany J., Cappelletti, Luca, Ravanmehr, Vida, Carbon, Seth, Shefchek, Kent A., Good, Benjamin M., Balhoff, James P., Fontana, Tommaso, Blau, Hannah, Matentzoglu, Nicolas, Harris, Nomi L., Munoz-Torres, Monica C., Haendel, Melissa A., Robinson, Peter N., Joachimiak, Marcin P., Mungall, Christopher J.
Publicado 2020

NSAID use and clinical outcomes in COVID-19 patients: A 38-center retrospective cohort study

por Reese, Justin T., Coleman, Ben, Chan, Lauren, Blau, Hannah, Callahan, Tiffany J., Cappelletti, Luca, Fontana, Tommaso, Bradwell, Katie Rebecca, Harris, Nomi L., Casiraghi, Elena, Valentini, Giorgio, Karlebach, Guy, Deer, Rachel, McMurry, Julie A., Haendel, Melissa A., Chute, Christopher G., Pfaff, Emily, Moffitt, Richard, Spratt, Heidi, Singh, Jasvinder, Mungall, Christopher J., Williams, Andrew E., Robinson, Peter N.
Publicado 2021

NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study

por Reese, Justin T., Coleman, Ben, Chan, Lauren, Blau, Hannah, Callahan, Tiffany J., Cappelletti, Luca, Fontana, Tommaso, Bradwell, Katie R., Harris, Nomi L., Casiraghi, Elena, Valentini, Giorgio, Karlebach, Guy, Deer, Rachel, McMurry, Julie A., Haendel, Melissa A., Chute, Christopher G., Pfaff, Emily, Moffitt, Richard, Spratt, Heidi, Singh, Jasvinder A., Mungall, Christopher J., Williams, Andrew E., Robinson, Peter N.
Publicado 2022

KG-Hub—building and exchanging biological knowledge graphs

por Caufield, J Harry, Putman, Tim, Schaper, Kevin, Unni, Deepak R, Hegde, Harshad, Callahan, Tiffany J, Cappelletti, Luca, Moxon, Sierra A T, Ravanmehr, Vida, Carbon, Seth, Chan, Lauren E, Cortes, Katherina, Shefchek, Kent A, Elsarboukh, Glass, Balhoff, Jim, Fontana, Tommaso, Matentzoglu, Nicolas, Bruskiewich, Richard M, Thessen, Anne E, Harris, Nomi L, Munoz-Torres, Monica C, Haendel, Melissa A, Robinson, Peter N, Joachimiak, Marcin P, Mungall, Christopher J, Reese, Justin T
Publicado 2023

OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies

por Jackson, Rebecca, Matentzoglu, Nicolas, Overton, James A, Vita, Randi, Balhoff, James P, Buttigieg, Pier Luigi, Carbon, Seth, Courtot, Melanie, Diehl, Alexander D, Dooley, Damion M, Duncan, William D, Harris, Nomi L, Haendel, Melissa A, Lewis, Suzanna E, Natale, Darren A, Osumi-Sutherland, David, Ruttenberg, Alan, Schriml, Lynn M, Smith, Barry, Stoeckert Jr., Christian J, Vasilevsky, Nicole A, Walls, Ramona L, Zheng, Jie, Mungall, Christopher J, Peters, Bjoern
Publicado 2021

The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences

por Stefancsik, Ray, Balhoff, James P., Balk, Meghan A., Ball, Robyn, Bello, Susan M., Caron, Anita R., Chessler, Elissa, de Souza, Vinicius, Gehrke, Sarah, Haendel, Melissa, Harris, Laura W., Harris, Nomi L., Ibrahim, Arwa, Koehler, Sebastian, Matentzoglu, Nicolas, McMurry, Julie A., Mungall, Christopher J., Munoz-Torres, Monica C., Putman, Tim, Robinson, Peter, Smedley, Damian, Sollis, Elliot, Thessen, Anne E, Vasilevsky, Nicole, Walton, David O., Osumi-Sutherland, David
Publicado 2023