Human metastable epiallele candidates link to common disorders

por Harris, R. Alan, Nagy-Szakal, Dorottya, Kellermayer, Richard
Publicado 2013

Single-Cell RNA-Seq Identifies Pathways and Genes Contributing to the Hyperandrogenemia Associated with Polycystic Ovary Syndrome

por Harris, R. Alan, McAllister, Jan M., Strauss, Jerome F.
Publicado 2023

Unusual sequence characteristics of human chromosome 19 are conserved across 11 nonhuman primates

por Harris, R. Alan, Raveendran, Muthuswamy, Worley, Kim C., Rogers, Jeffrey
Publicado 2020

Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variation using massively parallel DNA sequencing

por Coarfa, Cristian, Yu, Fuli, Miller, Christopher A, Chen, Zuozhou, Harris, R Alan, Milosavljevic, Aleksandar
Publicado 2010

SVhound: detection of regions that harbor yet undetected structural variation

por Paulin, Luis F., Raveendran, Muthuswamy, Harris, R. Alan, Rogers, Jeffrey, von Haeseler, Arndt, Sedlazeck, Fritz J.
Publicado 2023

Reduced meiotic recombination in rhesus macaques and the origin of the human recombination landscape

por Xue, Cheng, Rustagi, Navin, Liu, Xiaoming, Raveendran, Muthuswamy, Harris, R. Alan, Venkata, Manjunath Gorentla, Rogers, Jeffrey, Yu, Fuli
Publicado 2020

Colonic Mucosal Epigenome and Microbiome Development in Children and Adolescents

por Harris, R. Alan, Shah, Rajesh, Hollister, Emily B., Tronstad, Rune Rose, Hovdenak, Nils, Szigeti, Reka, Versalovic, James, Kellermayer, Richard
Publicado 2016

De novo Mutations in Domestic Cat are Consistent with an Effect of Reproductive Longevity on Both the Rate and Spectrum of Mutations

por Wang, Richard J, Raveendran, Muthuswamy, Harris, R Alan, Murphy, William J, Lyons, Leslie A, Rogers, Jeffrey, Hahn, Matthew W
Publicado 2022

Epigenomic footprints across 111 reference epigenomes reveal tissue-specific epigenetic regulation of lincRNAs

por Amin, Viren, Harris, R. Alan, Onuchic, Vitor, Jackson, Andrew R., Charnecki, Tim, Paithankar, Sameer, Lakshmi Subramanian, Sai, Riehle, Kevin, Coarfa, Cristian, Milosavljevic, Aleksandar
Publicado 2015

Comparison and quantitative verification of mapping algorithms for whole-genome bisulfite sequencing

por Kunde-Ramamoorthy, Govindarajan, Coarfa, Cristian, Laritsky, Eleonora, Kessler, Noah J., Harris, R. Alan, Xu, Mingchu, Chen, Rui, Shen, Lanlan, Milosavljevic, Aleksandar, Waterland, Robert A.
Publicado 2014

Examining the Effects of Hibernation on Germline Mutation Rates in Grizzly Bears

por Wang, Richard J, Peña-Garcia, Yadira, Bibby, Madeleine G, Raveendran, Muthuswamy, Harris, R Alan, Jansen, Heiko T, Robbins, Charles T, Rogers, Jeffrey, Kelley, Joanna L, Hahn, Matthew W
Publicado 2022

High-fat maternal diet during pregnancy persistently alters the offspring microbiome in a primate model

por Ma, Jun, Prince, Amanda L., Bader, David, Hu, Min, Ganu, Radhika, Baquero, Karalee, Blundell, Peter, Harris, R. Alan, Frias, Antonio E., Grove, Kevin L., Aagaard, Kjersti M.
Publicado 2014

DNA methylation-associated colonic mucosal immune and defense responses in treatment-naïve pediatric ulcerative colitis

por Harris, R Alan, Nagy-Szakal, Dorottya, Mir, Sabina AV, Frank, Eibe, Szigeti, Reka, Kaplan, Jess L, Bronsky, Jiri, Opekun, Antone, Ferry, George D, Winter, Harland, Kellermayer, Richard
Publicado 2014

Paternal age in rhesus macaques is positively associated with germline mutation accumulation but not with measures of offspring sociability

por Wang, Richard J., Thomas, Gregg W.C., Raveendran, Muthuswamy, Harris, R. Alan, Doddapaneni, Harshavardhan, Muzny, Donna M., Capitanio, John P., Radivojac, Predrag, Rogers, Jeffrey, Hahn, Matthew W.
Publicado 2020

Pedigree reconstruction and distant pairwise relatedness estimation from genome sequence data: A demonstration in a population of rhesus macaques (Macaca mulatta)

por Petty, Lauren E., Phillippi‐Falkenstein, Kathrine, Kubisch, H. Michael, Raveendran, Muthuswamy, Harris, R. Alan, Vallender, Eric J., Huff, Chad D., Bohm, Rudolf P., Rogers, Jeffrey, Below, Jennifer E.
Publicado 2021

Season of Conception in Rural Gambia Affects DNA Methylation at Putative Human Metastable Epialleles

por Waterland, Robert A., Kellermayer, Richard, Laritsky, Eleonora, Rayco-Solon, Pura, Harris, R. Alan, Travisano, Michael, Zhang, Wenjuan, Torskaya, Maria S., Zhang, Jiexin, Shen, Lanlan, Manary, Mark J., Prentice, Andrew M.
Publicado 2010

Evolutionary Breakpoints in the Gibbon Suggest Association between Cytosine Methylation and Karyotype Evolution

por Carbone, Lucia, Harris, R. Alan, Vessere, Gery M., Mootnick, Alan R., Humphray, Sean, Rogers, Jane, Kim, Sung K., Wall, Jeffrey D., Martin, David, Jurka, Jerzy, Milosavljevic, Aleksandar, de Jong, Pieter J.
Publicado 2009

GASZ Is Essential for Male Meiosis and Suppression of Retrotransposon Expression in the Male Germline

por Ma, Lang, Buchold, Gregory M., Greenbaum, Michael P., Roy, Angshumoy, Burns, Kathleen H., Zhu, Huifeng, Han, Derek Y., Harris, R. Alan, Coarfa, Cristian, Gunaratne, Preethi H., Yan, Wei, Matzuk, Martin M.
Publicado 2009

Correction: GASZ Is Essential for Male Meiosis and Suppression of Retrotransposon Expression in the Male Germline

por Ma, Lang, Buchold, Gregory M., Greenbaum, Michael P., Roy, Angshumoy, Burns, Kathleen H., Zhu, Huifeng, Han, Derek Y., Harris, R. Alan, Coarfa, Cristian, Gunaratne, Preethi H., Yan, Wei, Matzuk, Martin M.
Publicado 2009

Transcriptome Profiling of microRNA by Next-Gen Deep Sequencing Reveals Known and Novel miRNA Species in the Lipid Fraction of Human Breast Milk

por Munch, Erika M., Harris, R. Alan, Mohammad, Mahmoud, Benham, Ashley L., Pejerrey, Sasha M., Showalter, Lori, Hu, Min, Shope, Cynthia D., Maningat, Patricia D., Gunaratne, Preethi H., Haymond, Morey, Aagaard, Kjersti
Publicado 2013