Compound models and Pearson residuals for normalization of single-cell RNA-seq data without UMIs

por Lause, Jan, Ziegenhain, Christoph, Hartmanis, Leonard, Berens, Philipp, Kobak, Dmitry
Publicado 2023

Transcriptional kinetics and molecular functions of long noncoding RNAs

por Johnsson, Per, Ziegenhain, Christoph, Hartmanis, Leonard, Hendriks, Gert-Jan, Hagemann-Jensen, Michael, Reinius, Björn, Sandberg, Rickard
Publicado 2022

Genomic encoding of transcriptional burst kinetics

por Larsson, Anton, Johnsson, Per, Hagemann-Jensen, Michael, Hartmanis, Leonard, Faridani, Omid R., Reinius, Björn, Segerstolpe, Åsa, Rivera, Chloe M., Ren, Bing, Sandberg, Rickard
Publicado 2019

Microscale Bioreactors for in situ characterization of GI epithelial cell physiology

por Costello, Cait M., Phillipsen, Mikkel B., Hartmanis, Leonard M., Kwasnica, Marek A., Chen, Victor, Hackam, David, Chang, Matthew W., Bentley, William E., March, John C.
Publicado 2017

Layer 4 of mouse neocortex differs in cell types and circuit organization between sensory areas

por Scala, Federico, Kobak, Dmitry, Shan, Shen, Bernaerts, Yves, Laturnus, Sophie, Cadwell, Cathryn Rene, Hartmanis, Leonard, Froudarakis, Emmanouil, Castro, Jesus Ramon, Tan, Zheng Huan, Papadopoulos, Stelios, Patel, Saumil Surendra, Sandberg, Rickard, Berens, Philipp, Jiang, Xiaolong, Tolias, Andreas Savas
Publicado 2019

Author Correction: Layer 4 of mouse neocortex differs in cell types and circuit organization between sensory areas

por Scala, Federico, Kobak, Dmitry, Shan, Shen, Bernaerts, Yves, Laturnus, Sophie, Cadwell, Cathryn Rene, Hartmanis, Leonard, Froudarakis, Emmanouil, Castro, Jesus Ramon, Tan, Zheng Huan, Papadopoulos, Stelios, Patel, Saumil Surendra, Sandberg, Rickard, Berens, Philipp, Jiang, Xiaolong, Tolias, Andreas Savas
Publicado 2019

Phenotypic variation of transcriptomic cell types in mouse motor cortex

por Scala, Federico, Kobak, Dmitry, Bernabucci, Matteo, Bernaerts, Yves, Cadwell, Cathryn René, Castro, Jesus Ramon, Hartmanis, Leonard, Jiang, Xiaolong, Laturnus, Sophie, Miranda, Elanine, Mulherkar, Shalaka, Tan, Zheng Huan, Yao, Zizhen, Zeng, Hongkui, Sandberg, Rickard, Berens, Philipp, Tolias, Andreas S.
Publicado 2020

Cell type composition and circuit organization of clonally related excitatory neurons in the juvenile mouse neocortex

por Cadwell, Cathryn R, Scala, Federico, Fahey, Paul G, Kobak, Dmitry, Mulherkar, Shalaka, Sinz, Fabian H, Papadopoulos, Stelios, Tan, Zheng H, Johnsson, Per, Hartmanis, Leonard, Li, Shuang, Cotton, Ronald J, Tolias, Kimberley F, Sandberg, Rickard, Berens, Philipp, Jiang, Xiaolong, Tolias, Andreas Savas
Publicado 2020