Pathway-Level Information ExtractoR (PLIER) for gene expression data

por Mao, Weiguang, Zaslavsky, Elena, Hartmann, Boris M., Sealfon, Stuart C., Chikina, Maria
Publicado 2019

Combinatorial Cytokine Code Generates Anti-Viral State in Dendritic Cells

por Hartmann, Boris M., Marjanovic, Nada, Nudelman, German, Moran, Thomas M., Sealfon, Stuart C.
Publicado 2014

Comparative analysis of anti-viral transcriptomics reveals novel effects of influenza immune antagonism

por Thakar, Juilee, Hartmann, Boris M., Marjanovic, Nada, Sealfon, Stuart C., Kleinstein, Steven H.
Publicado 2015

Deciphering the combinatorial landscape of immunity

por Cappuccio, Antonio, Jensen, Shane T, Hartmann, Boris M, Sealfon, Stuart C, Soumelis, Vassili, Zaslavsky, Elena
Publicado 2020

Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection

por Zaslavsky, Elena, Nudelman, German, Marquez, Susanna, Hershberg, Uri, Hartmann, Boris M, Thakar, Juilee, Sealfon, Stuart C, Kleinstein, Steven H
Publicado 2013

Genetic Pathway in Acquisition and Loss of Vancomycin Resistance in a Methicillin Resistant Staphylococcus aureus (MRSA) Strain of Clonal Type USA300

por Gardete, Susana, Kim, Choonkeun, Hartmann, Boris M., Mwangi, Michael, Roux, Christelle M., Dunman, Paul M., Chambers, Henry F., Tomasz, Alexander
Publicado 2012

Comparing Host Module Activation Patterns and Temporal Dynamics in Infection by Influenza H1N1 Viruses

por Nudelman, Irina, Kudrin, Daniil, Nudelman, German, Deshpande, Raamesh, Hartmann, Boris M., Kleinstein, Steven H., Myers, Chad L., Sealfon, Stuart C., Zaslavsky, Elena
Publicado 2021

Differential Modulation of Innate Immune Responses in Human Primary Cells by Influenza A Viruses Carrying Human or Avian Nonstructural Protein 1

por Monteagudo, Paula L., Muñoz-Moreno, Raquel, Fribourg, Miguel, Potla, Uma, Mena, Ignacio, Marjanovic, Nada, Hartmann, Boris M., Sealfon, Stuart C., García-Sastre, Adolfo, Ramos, Irene, Fernández-Sesma, Ana
Publicado 2019

High-density single cell mRNA sequencing to characterize circulating tumor cells in hepatocellular carcinoma

por D’Avola, Delia, Villacorta-Martin, Carlos, Martins-Filho, Sebastiao N., Craig, Amanda, Labgaa, Ismail, von Felden, Johann, Kimaada, Allette, Bonaccorso, Antoinette, Tabrizian, Parissa, Hartmann, Boris M., Sebra, Robert, Schwartz, Myron, Villanueva, Augusto
Publicado 2018

Pandemic H1N1 influenza A viruses suppress immunogenic RIPK3-driven dendritic cell death

por Hartmann, Boris M., Albrecht, Randy A., Zaslavsky, Elena, Nudelman, German, Pincas, Hanna, Marjanovic, Nada, Schotsaert, Michael, Martínez-Romero, Carles, Fenutria, Rafael, Ingram, Justin P., Ramos, Irene, Fernandez-Sesma, Ana, Balachandran, Siddharth, García-Sastre, Adolfo, Sealfon, Stuart C.
Publicado 2017

Understanding multicellular function and disease with human tissue-specific networks

por Greene, Casey S., Krishnan, Arjun, Wong, Aaron K., Ricciotti, Emanuela, Zelaya, Rene A., Himmelstein, Daniel S., Zhang, Ran, Hartmann, Boris M., Zaslavsky, Elena, Sealfon, Stuart C., Chasman, Daniel I., FitzGerald, Garret A., Dolinski, Kara, Grosser, Tilo, Troyanskaya, Olga G.
Publicado 2015

Single-cell stabilization method identifies gonadotrope transcriptional dynamics and pituitary cell type heterogeneity

por Ruf-Zamojski, Frederique, Ge, Yongchao, Nair, Venugopalan, Zamojski, Michel, Pincas, Hanna, Toufaily, Chirine, Tome-Garcia, Jessica, Stoeckius, Marlon, Stephenson, William, Smith, Gregory R, Bernard, Daniel J, Tsankova, Nadejda M, Hartmann, Boris M, Fribourg, Miguel, Smibert, Peter, Swerdlow, Harold, Turgeon, Judith L, Sealfon, Stuart C
Publicado 2018

Innate Immune Response to Influenza Virus at Single-Cell Resolution in Human Epithelial Cells Revealed Paracrine Induction of Interferon Lambda 1

por Ramos, Irene, Smith, Gregory, Ruf-Zamojski, Frederique, Martínez-Romero, Carles, Fribourg, Miguel, Carbajal, Edwin A., Hartmann, Boris M., Nair, Venugopalan D., Marjanovic, Nada, Monteagudo, Paula L., DeJesus, Veronica A., Mutetwa, Tinaye, Zamojski, Michel, Tan, Gene S., Jayaprakash, Ciriyam, Zaslavsky, Elena, Albrecht, Randy A., Sealfon, Stuart C., García-Sastre, Adolfo, Fernandez-Sesma, Ana
Publicado 2019