Micelle PCR reduces chimera formation in 16S rRNA profiling of complex microbial DNA mixtures

por Boers, Stefan A., Hays, John P., Jansen, Ruud
Publicado 2015

Novel micelle PCR-based method for accurate, sensitive and quantitative microbiota profiling

por Boers, Stefan A., Hays, John P., Jansen, Ruud
Publicado 2017

Understanding and overcoming the pitfalls and biases of next-generation sequencing (NGS) methods for use in the routine clinical microbiological diagnostic laboratory

por Boers, Stefan A., Jansen, Ruud, Hays, John P.
Publicado 2019

Perceptions of point-of-care infectious disease testing among European medical personnel, point-of-care test kit manufacturers, and the general public

por Kaman, Wendy E, Andrinopoulou, Eleni-Rosalina, Hays, John P
Publicado 2013

Challenges in identifying antibiotic resistance targets for point-of-care diagnostics in general practice

por Mitsakakis, Konstantinos, Kaman, Wendy E, Elshout, Gijs, Specht, Mara, Hays, John P
Publicado 2018

Development and evaluation of a culture-free microbiota profiling platform (MYcrobiota) for clinical diagnostics

por Boers, Stefan A., Hiltemann, Saskia D., Stubbs, Andrew P., Jansen, Ruud, Hays, John P.
Publicado 2018

WeFaceNano: a user-friendly pipeline for complete ONT sequence assembly and detection of antibiotic resistance in multi-plasmid bacterial isolates

por Heikema, Astrid P., Jansen, Rick, Hiltemann, Saskia D., Hays, John P., Stubbs, Andrew P.
Publicado 2021

Differential Virulence Gene Expression of Group A Streptococcus Serotype M3 in Response to Co-Culture with Moraxella catarrhalis

por Verhaegh, Suzanne J. C., Flores, Anthony R., van Belkum, Alex, Musser, James M., Hays, John P.
Publicado 2013

Whole genome sequence analysis of NDM-1, CMY-4, and SHV-12 coproducing Salmonella enterica serovar Typhimurium isolated from a case of fatal burn wound infection

por Banerjee, Kokila, Sekar, Priyadharshini, Krishnan, Padma, Wattam, Alice Rebecca, Roy, Subhendu, Hays, John P, Menezes, Godfred A
Publicado 2018

Monitoring of microbial dynamics in a drinking water distribution system using the culture-free, user-friendly, MYcrobiota platform

por Boers, Stefan A., Prest, Emmanuelle I., Taučer-Kapteijn, Maja, Knezev, Aleksandra, Schaap, Peter G., Hays, John P., Jansen, Ruud
Publicado 2018

Galaxy mothur Toolset (GmT): a user-friendly application for 16S rRNA gene sequencing analysis using mothur

por Hiltemann, Saskia D, Boers, Stefan A, van der Spek, Peter J, Jansen, Ruud, Hays, John P, Stubbs, Andrew P
Publicado 2018

Perspectives on the Ethics of Antibiotic Overuse and on the Implementation of (New) Antibiotics

por Hays, John P., Ruiz-Alvarez, Maria Jose, Roson-Calero, Natalia, Amin, Rohul, Murugaiyan, Jayaseelan, van Dongen, Maarten B. M.
Publicado 2022

Datasets for benchmarking antimicrobial resistance genes in bacterial metagenomic and whole genome sequencing

por Raphenya, Amogelang R., Robertson, James, Jamin, Casper, de Oliveira Martins, Leonardo, Maguire, Finlay, McArthur, Andrew G., Hays, John P.
Publicado 2022

Differences in Systemic IgA Reactivity and Circulating Th Subsets in Healthy Volunteers With Specific Microbiota Enterotypes

por Grosserichter-Wagener, Christina, Radjabzadeh, Djawad, van der Weide, Hessel, Smit, Kyra N., Kraaij, Robert, Hays, John P., van Zelm, Menno C.
Publicado 2019

Evaluation of a FRET-Peptide Substrate to Predict Virulence in Pseudomonas aeruginosa

por Kaman, Wendy E., Arkoubi-El Arkoubi, Nora El, Roffel, Sanne, Endtz, Hubert P., van Belkum, Alex, Bikker, Floris J., Hays, John P.
Publicado 2013

Detection of Healthcare-Related Extended-Spectrum Beta-Lactamase-Producing Escherichia coli Transmission Events Using Combined Genetic and Phenotypic Epidemiology

por Voor in ‘t holt, Anne F., Wattel, Agnes A., Boers, Stefan A., Jansen, Ruud, Hays, John P., Goessens, Wil H. F., Vos, Margreet C.
Publicado 2016

CTX-M-15 Positive Escherichia coli and Klebsiella pneumoniae Outbreak in the Neonatal Intensive Care Unit of a Maternity Hospital in Ha’il, Saudi Arabia

por Almogbel, Mohammed, Altheban, Ahmed, Alenezi, Mohammed, Al-Motair, Khalid, Menezes, Godfred A, Elabbasy, Mohammed, Hammam, Sahar, Hays, John P, Khan, Mushtaq A
Publicado 2021

Characterization of the nasopharyngeal and middle ear microbiota in gastroesophageal reflux-prone versus gastroesophageal reflux non-prone children

por Boers, Stefan A., de Zeeuw, Marjolein, Jansen, Ruud, van der Schroeff, Marc P., van Rossum, Annemarie M. C., Hays, John P., Verhaegh, Suzanne J. C.
Publicado 2018

Anthrax protective antigen is a calcium-dependent serine protease

por Storm, Lisanne, Bikker, Floris J., Nazmi, Kamran, Hulst, Albert G., der Riet-Van Oeveren, Debora V., Veerman, Enno C.I., Hays, John P., Kaman, Wendy E.
Publicado 2018

Genetic Analysis of mcr-1-Carrying Plasmids From Gram-Negative Bacteria in a Dutch Tertiary Care Hospital: Evidence for Intrapatient and Interspecies Transmission Events

por Strepis, Nikolaos, Voor in ’t holt, Anne F., Vos, Margreet C., Zandijk, Willemien H. A., Heikema, Astrid P., Hays, John P., Severin, Juliëtte A., Klaassen, Corné H. W.
Publicado 2021